RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 BNC1Q01954 994 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CT45A2Q5DJT8 189 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 C3orf38Q5JPI3 329 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 RNF113BQ8IZP6 322 aaKnown RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 DNASE2BQ8WZ79 361 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CD180Q99467 661 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 C6orf62Q9GZU0 229 aaPredicted RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 UBQLN3Q9H347 655 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 EXOSC4Q9NPD3 245 aaKnown RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 C14orf105Q9NVL8 296 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 MRPS18AQ9NVS2 196 aaKnown RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 COLQQ9Y215 455 aaPredicted RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 IGHV1OR21-1A0A087WYE8 117 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 A0A1B0GVT2 93 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 WWP2O00308 870 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 ALAS2P22557 587 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 OR1D4P47884 311 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CXCL12P48061 93 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 FUT7Q11130 342 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 LIPKQ5VXJ0 399 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 ZNF613Q6PF04 617 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 Q6ZNX1 250 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 Q7L0L9 218 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CLDN22Q8N7P3 220 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 Q8N9G6 341 aaPredicted RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 BBS1Q8NFJ9 593 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 ABTB1Q969K4 478 aaPredicted RBP17.12■□□□□ 0.33
STRADB-202ENST00000392249 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CHRNA10Q9GZZ6 450 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 MMP27Q9H306 513 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 CUTCQ9NTM9 273 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 B3GNT3Q9Y2A9 372 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 OR10H1Q9Y4A9 318 aa17.12■□□□□ 0.33
STRADB-202ENST00000392249 A0A0B4J2E0 115 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 A0A1B0GWA3 101 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 A0A1B0GX12 115 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 K7ESF4 209 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 PRKNO60260 465 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 ARL4DP49703 201 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 CFHR1Q03591 330 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 PRKCDQ05655 676 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 MLLT11Q13015 90 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 ATP1A4Q13733 1029 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 OR2G6Q5TZ20 316 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 PRAMEF17Q5VTA0 474 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 AADACL4Q5VUY2 407 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 SNX29P2Q8IUI4 249 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 SLC35F3Q8IY50 421 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 SLC25A45Q8N413 288 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 B4GALNT2Q8NHY0 566 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 BRIX1Q8TDN6 353 aaKnown RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 BPIFA2Q96DR5 249 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 CDADC1Q9BWV3 514 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 RACGAP1Q9H0H5 632 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 ENKD1Q9H0I2 346 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 FGF20Q9NP95 211 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 MEPEQ9NQ76 525 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 DHCR7Q9UBM7 475 aaKnown RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 MED31Q9Y3C7 131 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 COL6A3P12111 3177 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 FAM183AA6NL82 134 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 RFPL3O75679 317 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 SAGP10523 405 aaPredicted RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 ZNF12P17014 697 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 ACAA2P42765 397 aaKnown RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 SMARCD3Q6STE5 483 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 GRAMD2AQ8IUY3 354 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 ZNF615Q8N8J6 731 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 OR52L1Q8NGH7 329 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 OR13C2Q8NGS9 318 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 RFKQ969G6 155 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 OTULINQ96BN8 352 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 HS6ST2Q96MM7 605 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 MED17Q9NVC6 651 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 NDUFB11Q9NX14 153 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 CHCHD3Q9NX63 227 aaKnown RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 CCDC59Q9P031 241 aaKnown RBP17.11■□□□□ 0.33
STRADB-202ENST00000392249 CBLCQ9ULV8 474 aa17.11■□□□□ 0.33
STRADB-202ENST00000392249 RP1P56715 2156 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 ARID1BQ8NFD5 2236 aaPredicted RBP17.1■□□□□ 0.33
STRADB-202ENST00000392249 IRGMA1A4Y4 181 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 C17orf105B2RV13 164 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 H3BMH7 237 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 CHP2O43745 196 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 NUDT21O43809 227 aaKnown RBP17.1■□□□□ 0.33
STRADB-202ENST00000392249 FOSL2P15408 326 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 ENDOUP21128 410 aaKnown RBP17.1■□□□□ 0.33
STRADB-202ENST00000392249 HSD11B2P80365 405 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 CDK20Q8IZL9 346 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 BCORP1Q8N888 145 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 CLIP3Q96DZ5 547 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 ZNF578Q96N58 590 aaPredicted RBP17.1■□□□□ 0.33
STRADB-202ENST00000392249 DACH2Q96NX9 599 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 G6PC3Q9BUM1 346 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 HINT3Q9NQE9 182 aaKnown RBP17.1■□□□□ 0.33
STRADB-202ENST00000392249 LANCL2Q9NS86 450 aa17.1■□□□□ 0.33
STRADB-202ENST00000392249 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms