RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DUSP6Q16828 381 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 GFOD2Q3B7J2 385 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 ALG1LQ6GMV1 187 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 EIF5AL1Q6IS14 154 aaKnown RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 KLHDC8BQ8IXV7 354 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 OR6N2Q8NGY6 317 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 OR14C36Q8NHC7 312 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 POTEKPQ9BYX7 375 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 TMEM38AQ9H6F2 299 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 CWH43Q9H720 699 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 MYEF2Q9P2K5 600 aaKnown RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 TRAPPC4Q9Y296 219 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 NAALAD2Q9Y3Q0 740 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 PRAMEF2O60811 474 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 AGR2O95994 175 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 OR3A2P47893 321 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SLC6A12P48065 614 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 IRF5Q13568 498 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 FCRLAQ7L513 359 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SAMD14Q8IZD0 417 aaPredicted RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 OR2L3Q8NG85 312 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 OR10K1Q8NGX5 313 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 OR56A3Q8NH54 315 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SYT4Q9H2B2 425 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 COLEC10Q9Y6Z7 277 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 LRRC37AA6NMS7 1700 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SDC3O75056 442 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 WISP3O95389 354 aaPredicted RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 AMY2AP04746 511 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 NPR2P20594 1047 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 RORAP35398 523 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 BTG1P62324 171 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 NKPD1Q17RQ9 610 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 FIGNL1Q6PIW4 674 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 TMEM173Q86WV6 379 aaPredicted RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 MMP21Q8N119 569 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SMPDL3BQ92485 455 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SLC25A36Q96CQ1 311 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 LMF1Q96S06 567 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 MCCC2Q9HCC0 563 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 USP36Q9P275 1121 aaKnown RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 LAMP5Q9UJQ1 280 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 LIPT1Q9Y234 373 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 TRABD2BA6NFA1 517 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 TXNL1O43396 289 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SCGB1D2O95969 90 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 GABRB1P18505 474 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
RTF1-201ENST00000389629 S100A2P29034 98 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 PGGHGQ32M88 737 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 ESPNLQ6ZVH7 1005 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SLC9B2Q86UD5 537 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 ZNF683Q8IZ20 524 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SYNPRQ8TBG9 265 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
RTF1-201ENST00000389629 ASGR2P07307 311 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 EIF5AP63241 154 aaKnown RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 ARFRP1Q13795 201 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 FAM69AQ5T7M9 428 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 VRK2Q86Y07 508 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 CHMP1AQ9HD42 196 aaPredicted RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 CENPMQ9NSP4 180 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 INHAP05111 366 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 GKN3PP0CG01 181 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 ZNF546Q86UE3 836 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 SRMSQ9H3Y6 488 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 SPATA6Q9NWH7 488 aaPredicted RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 DRD2P14416 443 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 HLA-FP30511 346 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 ZFP36L2P47974 494 aaKnown RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 OR2L5Q8NG80 312 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 OR10H5Q8NGA6 315 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 OR4E2Q8NGC2 313 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 CNN2Q99439 309 aaKnown RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 SPNS1Q9H2V7 528 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 BIN3Q9NQY0 253 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 PIPP12273 146 aaPredicted RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 FGL1Q08830 312 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 KCTD20Q7Z5Y7 419 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 RTN4RL1Q86UN2 441 aaPredicted RBP13.36□□□□□ -0.27
RTF1-201ENST00000389629 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 OR6T1Q8NGN1 323 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 OR5M3Q8NGP4 307 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 ELP4Q96EB1 424 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 OR52D1Q9H346 318 aa13.36□□□□□ -0.27
RTF1-201ENST00000389629 A0A1B0GV50 99 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 C1orf196B1AJZ1 125 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 RAD1O60671 282 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 CD34P28906 385 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 EPHA5P54756 1037 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 DGCR2P98153 550 aa13.35□□□□□ -0.27
RTF1-201ENST00000389629 CDNFQ49AH0 187 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms