RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 BCL10O95999 233 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 ACAA2P42765 397 aaKnown RBP23.25■■□□□ 1.31
SHOX2-201ENST00000389589 PRKCDQ05655 676 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 NCF4Q15080 339 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 VWA2Q5GFL6 755 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 WDR88Q6ZMY6 472 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 CDK20Q8IZL9 346 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 LSMEM1Q8N8F7 131 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 RNF217Q8TC41 542 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 TSSK6Q9BXA6 273 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 SLC7A5P2Q9GIP4 190 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 OR8D2Q9GZM6 311 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 LRRN3Q9H3W5 708 aa23.25■■□□□ 1.31
SHOX2-201ENST00000389589 A0A1W2PQM1 296 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 SNTNA6NMZ2 147 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 A8MUA0 341 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 SLC22A1O15245 554 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 IGKV3-11P04433 115 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 ADORA3P0DMS8 318 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 TIGD6Q17RP2 521 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 SYT14P1Q58G82 188 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 CYP4Z2PQ8N1L4 340 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 EID2Q8N6I1 236 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 OR14A16Q8NHC5 309 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 WDR36Q8NI36 951 aaKnown RBP23.24■■□□□ 1.31
SHOX2-201ENST00000389589 SLC2A12Q8TD20 617 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 DAZLQ92904 295 aaKnown RBP23.24■■□□□ 1.31
SHOX2-201ENST00000389589 FGF11Q92914 225 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 MED31Q9Y3C7 131 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 UNC119BA6NIH7 251 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 DDAH2O95865 285 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 DBTP11182 482 aaKnown RBP23.24■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF91Q05481 1191 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 NSDHLQ15738 373 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF367Q7RTV3 350 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 SLITRK4Q8IW52 837 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 ZSCAN1Q8NBB4 408 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF721Q8TF20 911 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 CLIP3Q96DZ5 547 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 TMEM80Q96HE8 168 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 LRR1Q96L50 414 aa23.24■■□□□ 1.31
SHOX2-201ENST00000389589 MRTO4Q9UKD2 239 aaKnown RBP23.24■■□□□ 1.31
SHOX2-201ENST00000389589 SERINC4A6NH21 518 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 CER1O95813 267 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 CD36P16671 472 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 RBM34P42696 430 aaKnown RBP23.23■■□□□ 1.31
SHOX2-201ENST00000389589 DCAF7P61962 342 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 MED17Q9NVC6 651 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 FBXO4Q9UKT5 387 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 SLC35A3Q9Y2D2 325 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 A0A1B0GWA3 101 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 FRG2CA6NGY1 282 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 EFCAB7A8K855 629 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 TMX2-CTNND1H3BSU7 103 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 IFI30P13284 250 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF182P17025 639 aaPredicted RBP23.23■■□□□ 1.31
SHOX2-201ENST00000389589 TGFBR2P37173 567 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 AQP6Q13520 282 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 RNLSQ5VYX0 342 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF440Q8IYI8 595 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF321PQ8N8H1 164 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF527Q8NB42 609 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 PLPP5Q8NEB5 264 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 BRIX1Q8TDN6 353 aaKnown RBP23.23■■□□□ 1.31
SHOX2-201ENST00000389589 LCORQ96JN0 433 aaPredicted RBP23.23■■□□□ 1.31
SHOX2-201ENST00000389589 ZNF582Q96NG8 517 aaPredicted RBP23.23■■□□□ 1.31
SHOX2-201ENST00000389589 TGIF2Q9GZN2 237 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 FLRT3Q9NZU0 649 aa23.23■■□□□ 1.31
SHOX2-201ENST00000389589 IGHV5-10-1A0A0J9YXX1 117 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 M0R082 166 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 CDC42EP2O14613 210 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 IL33O95760 270 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 CSTAP01040 98 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 PTHP01270 115 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 CSTF2P33240 577 aaKnown RBP eCLIP23.22■■□□□ 1.31
SHOX2-201ENST00000389589 CTBP2P56545 445 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 RPL13AP3Q6NVV1 102 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 TMPRSS11FQ6ZWK6 438 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 OR4C3Q8NH37 302 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 GRHL3Q8TE85 626 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 VN1R1Q9GZP7 353 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 SIDT1Q9NXL6 827 aaKnown RBP23.22■■□□□ 1.31
SHOX2-201ENST00000389589 MKL2Q9ULH7 1088 aa23.22■■□□□ 1.31
SHOX2-201ENST00000389589 IRGMA1A4Y4 181 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 HMGN1P05114 100 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 OCA2Q04671 838 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 SPCS2Q15005 226 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 TMEM44Q2T9K0 475 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 PGGHGQ32M88 737 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 KLHL26Q53HC5 615 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 CLEC12AQ5QGZ9 265 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 OR2T33Q8NG76 320 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 PFN4Q8NHR9 129 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 DPH1Q9BZG8 443 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 UBQLN4Q9NRR5 601 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 RPS6KB2Q9UBS0 482 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 PRODHO43272 600 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 NR4A1P22736 598 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 LCN1P31025 176 aa23.21■■□□□ 1.31
SHOX2-201ENST00000389589 ADH7P40394 386 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms