RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 ROBO4Q8WZ75 1007 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 PKNOX2Q96KN3 472 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 PPP1R36Q96LQ0 422 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 PPP3R2Q96LZ3 170 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 EML4Q9HC35 981 aaKnown RBP12.67□□□□□ -0.38
SHOX-202ENST00000381575 LGALS13Q9UHV8 139 aa12.67□□□□□ -0.38
SHOX-202ENST00000381575 MCTS1Q9ULC4 181 aaKnown RBP12.67□□□□□ -0.38
SHOX-202ENST00000381575 SONP18583 2426 aaKnown RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 NUDT14O95848 222 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 NUDT17P0C025 328 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 ME2P23368 584 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 MAPK1P28482 360 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 SOAT1P35610 550 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 SERPINB4P48594 390 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 RAC1P63000 192 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 C6orf136Q5SQH8 315 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 DCST2Q5T1A1 773 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.66□□□□□ -0.38
SHOX-202ENST00000381575 LSRQ86X29 649 aaPredicted RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 CLEC4FQ8N1N0 589 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 RIBC1Q8N443 379 aaPredicted RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 ATP6V1C2Q8NEY4 427 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 OR5D16Q8NGK9 328 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 OR6K3Q8NGY3 331 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 RFWD2Q8NHY2 731 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 ZBTB8AQ96BR9 441 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 ZNF524Q96C55 264 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 PERPQ96FX8 193 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 GMPPAQ96IJ6 420 aaPredicted RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 CCL19Q99731 98 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 SRXN1Q9BYN0 137 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 PIGUQ9H490 435 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 ZNF395Q9H8N7 513 aaPredicted RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 DUSP22Q9NRW4 184 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 GPATCH2Q9NW75 528 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 STOML1Q9UBI4 398 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.66□□□□□ -0.38
SHOX-202ENST00000381575 CARD8Q9Y2G2 431 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 V9GYY5 206 aaPredicted RBP12.66□□□□□ -0.38
SHOX-202ENST00000381575 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
SHOX-202ENST00000381575 A0A1W2PQD3 144 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 C7orf72A4D263 438 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 CFLARO15519 480 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 EFNA2O43921 213 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 SMPD2O60906 423 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
SHOX-202ENST00000381575 PLAUP00749 431 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 LINGO3P0C6S8 592 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ATP6V1C1P21283 382 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ADSLP30566 484 aaPredicted RBP12.65□□□□□ -0.38
SHOX-202ENST00000381575 CASP9P55211 416 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 FGFBP1Q14512 234 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 MLC1Q15049 377 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ZCCHC12Q6PEW1 402 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 STAC2Q6ZMT1 411 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ESPNLQ6ZVH7 1005 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 WFDC8Q8IUA0 241 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 P3H2Q8IVL5 708 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 CIARTQ8N365 385 aaPredicted RBP12.65□□□□□ -0.38
SHOX-202ENST00000381575 FBXO27Q8NI29 283 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ACTRT2Q8TDY3 377 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ADAMTS15Q8TE58 950 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 OR5P2Q8WZ92 322 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 OSTF1Q92882 214 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 TUBGCP3Q96CW5 907 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 C18orf12Q96KH6 178 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 KLHL15Q96M94 604 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 STACQ99469 402 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 ACTRT3Q9BYD9 372 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 PLSCR4Q9NRQ2 329 aa12.65□□□□□ -0.38
SHOX-202ENST00000381575 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
SHOX-202ENST00000381575 IGHV3-15A0A0B4J1V0 119 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.64□□□□□ -0.39
SHOX-202ENST00000381575 WDR91A4D1P6 747 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 ITM2AO43736 263 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 BPGMP07738 259 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 INHBBP09529 407 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 G6PDP11413 515 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 FOSL1P15407 271 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 AGTR1P30556 359 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 PCYT1AP49585 367 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 CCR4P51679 360 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 OCRLQ01968 901 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 LTBQ06643 244 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 TSC22D1Q15714 1073 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 PDCD2Q16342 344 aaPredicted RBP12.64□□□□□ -0.39
SHOX-202ENST00000381575 ACKR1Q16570 336 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 PGS1Q32NB8 556 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 MISPQ8IVT2 679 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 CLECL1Q8IZS7 167 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 TMCO5AQ8N6Q1 288 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 OR56A1Q8NGH5 318 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 OR7D2Q96RA2 312 aa12.64□□□□□ -0.39
SHOX-202ENST00000381575 SERHL2Q9H4I8 314 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms