RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
LCMT1-201ENST00000380962 RIT1Q92963 219 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 SLC25A46Q96AG3 418 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 CEP19Q96LK0 163 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 SAMD8Q96LT4 415 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 KCTD7Q96MP8 289 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 ASB6Q9NWX5 421 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 TXNL4BQ9NX01 149 aaKnown RBP12.36□□□□□ -0.43
LCMT1-201ENST00000380962 CBLCQ9ULV8 474 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 DOLKQ9UPQ8 538 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 MRPS17Q9Y2R5 130 aaKnown RBP12.36□□□□□ -0.43
LCMT1-201ENST00000380962 PCDHGB6Q9Y5F9 930 aa12.36□□□□□ -0.43
LCMT1-201ENST00000380962 SPIN1Q9Y657 262 aaPredicted RBP12.36□□□□□ -0.43
LCMT1-201ENST00000380962 BRWD1Q9NSI6 2320 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 TRDV1A0A1B0GX56 115 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 GXYLT2A0PJZ3 443 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 FITM1A5D6W6 292 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 SLC9B1P1A6NJY1 282 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 EFCAB7A8K855 629 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 NPIPB9F8W1W9 429 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 H0YIG0 161 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 J3QRE1 110 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 BHLHE40O14503 412 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 CDC42EP2O14613 210 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 HRO43593 1189 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 FOXS1O43638 330 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 IFI30P13284 250 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 PRG2P13727 222 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 CD53P19397 219 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 CD38P28907 300 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 GABRA4P48169 554 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 SLC9A3P48764 834 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 RACK1P63244 317 aaKnown RBP12.35□□□□□ -0.43
LCMT1-201ENST00000380962 PSG6Q00889 435 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 STX4Q12846 297 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 SERTAD2Q14140 314 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 FIGNL1Q6PIW4 674 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 MEPCEQ7L2J0 689 aaKnown RBP12.35□□□□□ -0.43
LCMT1-201ENST00000380962 CXXC5Q7LFL8 322 aaKnown RBP12.35□□□□□ -0.43
LCMT1-201ENST00000380962 SLC22A16Q86VW1 577 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 SLC2A12Q8TD20 617 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 AP3S1Q92572 193 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 RBM18Q96H35 190 aaKnown RBP12.35□□□□□ -0.43
LCMT1-201ENST00000380962 DGAT2Q96PD7 388 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 Q9N2J8 555 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 PRTFDC1Q9NRG1 225 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 CMC2Q9NRP2 79 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 GPR52Q9Y2T5 361 aa12.35□□□□□ -0.43
LCMT1-201ENST00000380962 CAB39Q9Y376 341 aaPredicted RBP12.35□□□□□ -0.43
LCMT1-201ENST00000380962 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 TLCD2A6NGC4 264 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 SLC22A31A6NKX4 558 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 ZGLP1P0C6A0 271 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 GKN3PP0CG01 181 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 TBXA2RP21731 343 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 MAZP56270 477 aaKnown RBP12.34□□□□□ -0.43
LCMT1-201ENST00000380962 FUT7Q11130 342 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 SLC13A2Q13183 592 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 GAS6Q14393 721 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 FGFBP1Q14512 234 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 STEAP3Q658P3 488 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 NIPAL3Q6P499 406 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 OGFOD3Q6PK18 319 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 SMARCD3Q6STE5 483 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 TMPRSS11AQ6ZMR5 421 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 WDR88Q6ZMY6 472 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 MEX3DQ86XN8 651 aaKnown RBP12.34□□□□□ -0.43
LCMT1-201ENST00000380962 SFTPA2Q8IWL1 248 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 ZNF440Q8IYI8 595 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 OR7G1Q8NGA0 311 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 TM9SF4Q92544 642 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 DPH1Q9BZG8 443 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 LMAN1LQ9HAT1 526 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 HINT3Q9NQE9 182 aaKnown RBP12.34□□□□□ -0.43
LCMT1-201ENST00000380962 ABCB10Q9NRK6 738 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 STARD5Q9NSY2 213 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 ERVK13-1Q9NX77 482 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 DNAJB12Q9NXW2 375 aaKnown RBP12.34□□□□□ -0.43
LCMT1-201ENST00000380962 TNFRSF10DQ9UBN6 386 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 PRODH2Q9UF12 536 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 POLHQ9Y253 713 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 SIGLEC7Q9Y286 467 aa12.34□□□□□ -0.43
LCMT1-201ENST00000380962 CDH23Q9H251 3354 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
LCMT1-201ENST00000380962 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
LCMT1-201ENST00000380962 TBX1O43435 398 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 HCRTR1O43613 425 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 PTP4A3O75365 173 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 IGF2P01344 180 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 HLA-DPB1P04440 258 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 MAKP20794 623 aa12.33□□□□□ -0.44
LCMT1-201ENST00000380962 CFL1P23528 166 aaKnown RBP12.33□□□□□ -0.44
LCMT1-201ENST00000380962 MLLT3P42568 568 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms