RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HMGN2P46Q86SG4 172 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 ZZZ3Q8IYH5 903 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 C11orf65Q8NCR3 313 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 HIPK4Q8NE63 616 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 TOR1AIP2Q8NFQ8 470 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 OR52P1PQ8NH57 321 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 ARSGQ96EG1 525 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 SH3YL1Q96HL8 342 aaPredicted RBP17.01■□□□□ 0.31
SSU72-203ENST00000378725 ZNF583Q96ND8 569 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 KLHDC3Q9BQ90 382 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 ECSITQ9BQ95 431 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 SPRR3Q9UBC9 169 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 DKKL1Q9UK85 242 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 AP3M1Q9Y2T2 418 aa17.01■□□□□ 0.31
SSU72-203ENST00000378725 A0A087WZY1 265 aa17■□□□□ 0.31
SSU72-203ENST00000378725 CLDN24A6NM45 220 aa17■□□□□ 0.31
SSU72-203ENST00000378725 PYCARD-AS1I3L0S3 204 aa17■□□□□ 0.31
SSU72-203ENST00000378725 ZNHIT1O43257 154 aa17■□□□□ 0.31
SSU72-203ENST00000378725 SLC19A2O60779 497 aa17■□□□□ 0.31
SSU72-203ENST00000378725 BCAS1O75363 584 aaPredicted RBP17■□□□□ 0.31
SSU72-203ENST00000378725 WISP1O95388 367 aa17■□□□□ 0.31
SSU72-203ENST00000378725 THBS1P07996 1170 aa17■□□□□ 0.31
SSU72-203ENST00000378725 STSP08842 583 aa17■□□□□ 0.31
SSU72-203ENST00000378725 NID1P14543 1247 aa17■□□□□ 0.31
SSU72-203ENST00000378725 IL7RP16871 459 aa17■□□□□ 0.31
SSU72-203ENST00000378725 NUDT2P50583 147 aa17■□□□□ 0.31
SSU72-203ENST00000378725 GFRA1P56159 465 aa17■□□□□ 0.31
SSU72-203ENST00000378725 B3GALT5-AS1P59052 145 aa17■□□□□ 0.31
SSU72-203ENST00000378725 PLAURQ03405 335 aa17■□□□□ 0.31
SSU72-203ENST00000378725 SKP2Q13309 424 aa17■□□□□ 0.31
SSU72-203ENST00000378725 CYP51A1Q16850 503 aa17■□□□□ 0.31
SSU72-203ENST00000378725 TMEM44Q2T9K0 475 aa17■□□□□ 0.31
SSU72-203ENST00000378725 EIF2S3LQ2VIR3 472 aaKnown RBP17■□□□□ 0.31
SSU72-203ENST00000378725 NDUFAF6Q330K2 333 aa17■□□□□ 0.31
SSU72-203ENST00000378725 ARSKQ6UWY0 536 aa17■□□□□ 0.31
SSU72-203ENST00000378725 SLC30A8Q8IWU4 369 aa17■□□□□ 0.31
SSU72-203ENST00000378725 SLC15A3Q8IY34 581 aa17■□□□□ 0.31
SSU72-203ENST00000378725 OR5W2Q8NH69 310 aa17■□□□□ 0.31
SSU72-203ENST00000378725 OR14L1PQ8NHC6 308 aa17■□□□□ 0.31
SSU72-203ENST00000378725 GPR119Q8TDV5 335 aa17■□□□□ 0.31
SSU72-203ENST00000378725 WDR60Q8WVS4 1066 aa17■□□□□ 0.31
SSU72-203ENST00000378725 CMTM6Q9NX76 183 aa17■□□□□ 0.31
SSU72-203ENST00000378725 ZNF232Q9UNY5 417 aa17■□□□□ 0.31
SSU72-203ENST00000378725 IFT52Q9Y366 437 aa17■□□□□ 0.31
SSU72-203ENST00000378725 GPC6Q9Y625 555 aaPredicted RBP17■□□□□ 0.31
SSU72-203ENST00000378725 GCM2O75603 506 aaPredicted RBP16.99■□□□□ 0.31
SSU72-203ENST00000378725 ACTL6AO96019 429 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 PABPC4LP0CB38 370 aaKnown RBP16.99■□□□□ 0.31
SSU72-203ENST00000378725 BMP7P18075 431 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 HK1P19367 917 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 CHMP24386 653 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 PCGF2P35227 344 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 PCBP3P57721 371 aaKnown RBP16.99■□□□□ 0.31
SSU72-203ENST00000378725 EEF1A1P68104 462 aaKnown RBP16.99■□□□□ 0.31
SSU72-203ENST00000378725 ZSWIM7Q19AV6 140 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 VMACQ2NL98 169 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 LIN52Q52LA3 116 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 VASNQ6EMK4 673 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 VRK2Q86Y07 508 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 FAM57AQ8TBR7 257 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 SARAFQ96BY9 339 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 REXO5Q96IC2 774 aaKnown RBP16.99■□□□□ 0.31
SSU72-203ENST00000378725 EXO5Q9H790 373 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 EXOSC3Q9NQT5 275 aaKnown RBP16.99■□□□□ 0.31
SSU72-203ENST00000378725 MED17Q9NVC6 651 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 OSGIN2Q9Y236 505 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 ANGPT4Q9Y264 503 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 SLC6A5Q9Y345 797 aa16.99■□□□□ 0.31
SSU72-203ENST00000378725 NCKAP5O14513 1909 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 C7orf72A4D263 438 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 CDHR4A6H8M9 788 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 NPIPA2E9PIF3 369 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 NPIPA3F8WFD2 350 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 BCKDKO14874 412 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 GMFGO60234 142 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 LINGO3P0C6S8 592 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 UBTFL6P0CB48 400 aaPredicted RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 ABOP16442 354 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 CPA2P48052 419 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 CRYZQ08257 329 aaKnown RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 LARS2Q15031 903 aaKnown RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 PLPPR5Q32ZL2 321 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 MRPL2Q5T653 305 aaKnown RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 RNF220Q5VTB9 566 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 IFNEQ86WN2 208 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 KRT73Q86Y46 540 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 GRAMD2AQ8IUY3 354 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 PRR7Q8TB68 274 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 CNOT9Q92600 299 aaKnown RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 ABTB1Q969K4 478 aaPredicted RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 ZBTB8AQ96BR9 441 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 NSL1Q96IY1 281 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 TIMP4Q99727 224 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 RSPO3Q9BXY4 272 aaPredicted RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 UGT2B28Q9BY64 529 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 PIF1Q9H611 641 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 ZNF443Q9Y2A4 671 aaPredicted RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 RPH3AQ9Y2J0 694 aaPredicted RBP16.98■□□□□ 0.31
SSU72-203ENST00000378725 CHST2Q9Y4C5 530 aa16.98■□□□□ 0.31
SSU72-203ENST00000378725 FAM220BPB1ANY3 271 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms