RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 METTL2AQ96IZ6 378 aaKnown RBP17.54■□□□□ 0.4
CCDC107-202ENST00000378406 TMEM204Q9BSN7 226 aa17.54■□□□□ 0.4
CCDC107-202ENST00000378406 EBPLQ9BY08 206 aa17.54■□□□□ 0.4
CCDC107-202ENST00000378406 PTGES2Q9H7Z7 377 aa17.54■□□□□ 0.4
CCDC107-202ENST00000378406 GIMAP4Q9NUV9 329 aa17.54■□□□□ 0.4
CCDC107-202ENST00000378406 DCTN4Q9UJW0 460 aa17.54■□□□□ 0.4
CCDC107-202ENST00000378406 POLR3HQ9Y535 204 aaPredicted RBP17.54■□□□□ 0.4
CCDC107-202ENST00000378406 AP4B1Q9Y6B7 739 aa17.54■□□□□ 0.4
CCDC107-202ENST00000378406 GNG14A0A1W2PPG7 69 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 HS3ST1O14792 307 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 LBPP18428 481 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 KIAA0040Q15053 153 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 SGCBQ16585 318 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 TMEM44Q2T9K0 475 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 GLYR1Q49A26 553 aaPredicted RBP17.53■□□□□ 0.4
CCDC107-202ENST00000378406 CYP27C1Q4G0S4 372 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 RFTN2Q52LD8 501 aaPredicted RBP17.53■□□□□ 0.4
CCDC107-202ENST00000378406 FNDC5Q8NAU1 212 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 OR6K3Q8NGY3 331 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 RFWD2Q8NHY2 731 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 C16orf78Q8WTQ4 265 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 PLPPR2Q96GM1 343 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 FAM120CQ9NX05 1096 aaKnown RBP17.53■□□□□ 0.4
CCDC107-202ENST00000378406 SIRT5Q9NXA8 310 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 CLEC4AQ9UMR7 237 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 EMC9Q9Y3B6 208 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 MXRA5Q9NR99 2828 aa17.53■□□□□ 0.4
CCDC107-202ENST00000378406 ANK3Q12955 4377 aaKnown RBP17.53■□□□□ 0.4
CCDC107-202ENST00000378406 A0A0G2JND7 137 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 GMNCA6NCL1 334 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 COQ9O75208 318 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 ANXA4P09525 319 aaPredicted RBP17.52■□□□□ 0.4
CCDC107-202ENST00000378406 MPIP34949 423 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 IDH3AP50213 366 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 HEPACAMQ14CZ8 416 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCDC107-202ENST00000378406 HEPHL1Q6MZM0 1159 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 NOXRED1Q6NXP6 359 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 GALNT18Q6P9A2 607 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 MARCH3Q86UD3 253 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 MAPK1IP1LQ8NDC0 245 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 ACTRT2Q8TDY3 377 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 NANOS1Q8WY41 292 aaKnown RBP17.52■□□□□ 0.4
CCDC107-202ENST00000378406 C11orf24Q96F05 449 aaPredicted RBP17.52■□□□□ 0.4
CCDC107-202ENST00000378406 GMPPAQ96IJ6 420 aaPredicted RBP17.52■□□□□ 0.4
CCDC107-202ENST00000378406 OR52B2Q96RD2 323 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 C1orf50Q9BV19 199 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 FAM107BQ9H098 131 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 TMED5Q9Y3A6 229 aa17.52■□□□□ 0.4
CCDC107-202ENST00000378406 A0A087WV62 115 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 MYO1GB0I1T2 1018 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 SHISA8B8ZZ34 492 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 RNF223E7ERA6 249 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 SS18L1O75177 396 aaPredicted RBP17.51■□□□□ 0.39
CCDC107-202ENST00000378406 IL11P20809 199 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 MAPK1P28482 360 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 EMX2Q04743 252 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 DMTNQ08495 405 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 MAD2L1Q13257 205 aaPredicted RBP17.51■□□□□ 0.39
CCDC107-202ENST00000378406 DECR1Q16698 335 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 PRSS53Q2L4Q9 553 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 IL23RQ5VWK5 629 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 CGB2Q6NT52 195 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 WFDC8Q8IUA0 241 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 CDC26Q8NHZ8 85 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 MAELQ96JY0 434 aaKnown RBP17.51■□□□□ 0.39
CCDC107-202ENST00000378406 FCRL1Q96LA6 429 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 BBS4Q96RK4 519 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 EBF4Q9BQW3 602 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 SIKE1Q9BRV8 207 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 PRRG4Q9BZD6 226 aa17.51■□□□□ 0.39
CCDC107-202ENST00000378406 NSRP1Q9H0G5 558 aaKnown RBP17.51■□□□□ 0.39
CCDC107-202ENST00000378406 C19orf53Q9UNZ5 99 aaPredicted RBP17.51■□□□□ 0.39
CCDC107-202ENST00000378406 IGLV3-32A0A0A0MS00 114 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 EIF1AYO14602 144 aaKnown RBP17.5■□□□□ 0.39
CCDC107-202ENST00000378406 PSMG1O95456 288 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 IL33O95760 270 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 PLGP00747 810 aaPredicted RBP17.5■□□□□ 0.39
CCDC107-202ENST00000378406 EIF1AXP47813 144 aaKnown RBP17.5■□□□□ 0.39
CCDC107-202ENST00000378406 CLEC12BQ2HXU8 276 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 SMU1Q2TAY7 513 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 LSM12Q3MHD2 195 aaKnown RBP17.5■□□□□ 0.39
CCDC107-202ENST00000378406 PPP4R4Q6NUP7 873 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 APOOLQ6UXV4 268 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 CPLX4Q7Z7G2 160 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 CEP70Q8NHQ1 597 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 AKAP1Q92667 903 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC107-202ENST00000378406 TMEM120AQ9BXJ8 343 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 ACTR6Q9GZN1 396 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 TCF7L2Q9NQB0 619 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 LAMP3Q9UQV4 416 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 CR1P17927 2039 aa17.5■□□□□ 0.39
CCDC107-202ENST00000378406 ABCA1O95477 2261 aa17.49■□□□□ 0.39
CCDC107-202ENST00000378406 UPK1AO00322 258 aa17.49■□□□□ 0.39
CCDC107-202ENST00000378406 GMFGO60234 142 aa17.49■□□□□ 0.39
CCDC107-202ENST00000378406 BCKDHAP12694 445 aa17.49■□□□□ 0.39
CCDC107-202ENST00000378406 DRD4P21917 467 aa17.49■□□□□ 0.39
CCDC107-202ENST00000378406 CLK3P49761 638 aaKnown RBP17.49■□□□□ 0.39
CCDC107-202ENST00000378406 ARFIP2P53365 341 aa17.49■□□□□ 0.39
CCDC107-202ENST00000378406 CTBP2P56545 445 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms