RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TNFRSF21O75509 655 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 CDK1P06493 297 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 GAS6Q14393 721 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 ALG10Q5BKT4 473 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 OR7G2Q8NG99 324 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 CNN2Q99439 309 aaKnown RBP13.52□□□□□ -0.25
TCOF1-202ENST00000377797 LRRC61Q9BV99 259 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 DIABLOQ9NR28 239 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 TMEM14AQ9Y6G1 99 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 UBE2QL1A1L167 161 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 H3BML4 177 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 SLC16A6O15403 523 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 RLN1P04808 185 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 HSD17B7P56937 341 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 POU4F2Q12837 409 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 CBX3Q13185 183 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 RNF165Q6ZSG1 346 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.25
TCOF1-202ENST00000377797 C19orf53Q9UNZ5 99 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-202ENST00000377797 EPOPA6NHQ4 379 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF749O43361 778 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 PRPS1P60891 318 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 DCAF7P61962 342 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 FGL2Q14314 439 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 LRRC17Q8N6Y2 441 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ZMYND19Q96E35 227 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 RXFP3Q9NSD7 469 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ATXN7L1Q9ULK2 861 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 MIA3Q5JRA6 1907 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 RALGAPA2Q2PPJ7 1873 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 FAM171A2A8MVW0 826 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 LMO7DNF2Z398 122 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ADAM23O75077 832 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 SLC2A2P11168 524 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 WNT4P56705 351 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 RAE1P78406 368 aaKnown RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 RUNX2Q13950 521 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 LINGO2Q7L985 606 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 CEACAM19Q7Z692 300 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 OR14A16Q8NHC5 309 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 SLC39A1Q9NY26 324 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 FKBP7Q9Y680 259 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 PSMD9O00233 223 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 PEPDP12955 493 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF91Q05481 1191 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 PGGHGQ32M88 737 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ANKRD34AQ69YU3 496 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ADGRF3Q8IZF5 1079 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 SLC7A13Q8TCU3 470 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 GGHQ92820 318 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 UBE2FQ969M7 185 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ELF4Q99607 663 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 TTYH2Q9BSA4 534 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 MROQ9BYG7 248 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 TMEM185BQ9H7F4 350 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 DUSP22Q9NRW4 184 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 TRBV2A0A0J9YWF9 115 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 CD8B2A6NJW9 211 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 FLRT2O43155 660 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 CD8BP10966 210 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 MRPL19P49406 292 aaKnown RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF554Q86TJ5 538 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 UBQLNLQ8IYU4 475 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 SDR9C7Q8NEX9 313 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 LMF2Q9BU23 707 aaKnown RBP13.51□□□□□ -0.25
TCOF1-202ENST00000377797 HPF1Q9NWY4 346 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 TAS2R10Q9NYW0 307 aa13.51□□□□□ -0.25
TCOF1-202ENST00000377797 FCMRO60667 390 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 FOLR3P41439 243 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 PDSS1Q5T2R2 415 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 WDR34Q96EX3 536 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 SLC35A4Q96G79 324 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 ACOT13Q9NPJ3 140 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 CNOT2Q9NZN8 540 aaKnown RBP13.5□□□□□ -0.25
TCOF1-202ENST00000377797 CLEC1BQ9P126 229 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 STUB1Q9UNE7 303 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 MMACHCQ9Y4U1 282 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 CEPT1Q9Y6K0 416 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 NRG2O14511 850 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF264O43296 627 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 ATP6V1G1O75348 118 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 CCNKO75909 580 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 ZFAND5O76080 213 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 P04436 131 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 ZNF20P17024 532 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 CLRN1P58418 232 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 CCDC74AQ96AQ1 378 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 SDF2Q99470 211 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 WNT16Q9UBV4 365 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 PISDQ9UG56 409 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 A0A1W2PPL8 197 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 LDOC1O95751 146 aaPredicted RBP13.5□□□□□ -0.25
TCOF1-202ENST00000377797 GYPBP06028 91 aa13.5□□□□□ -0.25
TCOF1-202ENST00000377797 BMXP51813 675 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms