RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ATP6V1C1P21283 382 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 FRKP42685 505 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 EEFSECP57772 596 aaKnown RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 POU6F2P78424 691 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 PON3Q15166 354 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 CEP85LQ5SZL2 805 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF614Q8N883 585 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 CCL19Q99731 98 aa17.19■□□□□ 0.34
CBWD3-204ENST00000377349 SIRT3Q9NTG7 399 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 FAF1Q9UNN5 650 aaPredicted RBP17.19■□□□□ 0.34
CBWD3-204ENST00000377349 IGLV3-32A0A0A0MS00 114 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 NPIPA5A0A0B4J1W7 369 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 NPIPA7E9PJI5 369 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 EIF1AYO14602 144 aaKnown RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 THBDP07204 575 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 NPIPA8P0DM63 369 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 G6PDP11413 515 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 EIF1AXP47813 144 aaKnown RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 CCT3P49368 545 aaKnown RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF41P51814 821 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 RPS3AP61247 264 aaKnown RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 OCRLQ01968 901 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 YTHDF3Q7Z739 585 aaKnown RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 GGNQ86UU5 652 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 ZNF781Q8N8C0 355 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 OR6Y1Q8NGX8 325 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 SLC39A3Q9BRY0 314 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 PRRG4Q9BZD6 226 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 TMEM185BQ9H7F4 350 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 CXorf36Q9H7Y0 433 aa17.18■□□□□ 0.34
CBWD3-204ENST00000377349 FBN1P35555 2871 aaKnown RBP17.18■□□□□ 0.34
CBWD3-204ENST00000377349 PLCE1Q9P212 2302 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 TRIM64A6NGJ6 449 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 TRIM64BA6NI03 449 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 FAM171A2A8MVW0 826 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 LINC01387J3KSC0 135 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 NUDT14O95848 222 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 SERPINE1P05121 402 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 FPR1P21462 350 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 ETV4P43268 484 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 SLC6A8P48029 635 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 KCNJ5P48544 419 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 LSM12Q3MHD2 195 aaKnown RBP17.17■□□□□ 0.34
CBWD3-204ENST00000377349 MREGQ8N565 214 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 OR56A1Q8NGH5 318 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 ADAMTS15Q8TE58 950 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 OR5P2Q8WZ92 322 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 HOXB13Q92826 284 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-204ENST00000377349 PERPQ96FX8 193 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 ZC3HAV1LQ96H79 300 aaKnown RBP17.17■□□□□ 0.34
CBWD3-204ENST00000377349 DUSP26Q9BV47 211 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 TMEM109Q9BVC6 243 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 BTBD2Q9BX70 525 aa17.17■□□□□ 0.34
CBWD3-204ENST00000377349 ALG1L2C9J202 215 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 PRPS1L1P21108 318 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 TBXA2RP21731 343 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 BGNP21810 368 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 MAP3K8P41279 467 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 ABCE1P61221 599 aaKnown RBP17.16■□□□□ 0.34
CBWD3-204ENST00000377349 MAD2L1Q13257 205 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-204ENST00000377349 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.16■□□□□ 0.34
CBWD3-204ENST00000377349 GLYR1Q49A26 553 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-204ENST00000377349 ANKRD34AQ69YU3 496 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 CDC73Q6P1J9 531 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 C20orf204Q6ZNR8 217 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 FAM214BQ7L5A3 538 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 ANKRD42Q8N9B4 389 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 PHOSPHO1Q8TCT1 267 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 NPAS1Q99742 590 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 GSX2Q9BZM3 304 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 UBQLN4Q9NRR5 601 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 NOP53Q9NZM5 478 aaKnown RBP17.16■□□□□ 0.34
CBWD3-204ENST00000377349 NTMQ9P121 344 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 AP4B1Q9Y6B7 739 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 CUBNO60494 3623 aa17.16■□□□□ 0.34
CBWD3-204ENST00000377349 KLF4O43474 513 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 PLGP00747 810 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-204ENST00000377349 MYZAPP0CAP1 466 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 RPS26P62854 115 aaKnown RBP17.15■□□□□ 0.34
CBWD3-204ENST00000377349 FGFBP1Q14512 234 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 MLC1Q15049 377 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 DCST2Q5T1A1 773 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 ZCCHC12Q6PEW1 402 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 CLEC4FQ8N1N0 589 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 TMCO5AQ8N6Q1 288 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 RNF145Q96MT1 663 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 ACTRT3Q9BYD9 372 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 STOML1Q9UBI4 398 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 PROCRQ9UNN8 238 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 ALPK2Q86TB3 2170 aa17.15■□□□□ 0.34
CBWD3-204ENST00000377349 KIAA1324LA8MWY0 1029 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-204ENST00000377349 SMAD7O15105 426 aaKnown RBP17.14■□□□□ 0.33
CBWD3-204ENST00000377349 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-204ENST00000377349 ME2P23368 584 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 SLC1A6P48664 564 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 CD226Q15762 336 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 CTU2Q2VPK5 515 aaKnown RBP17.14■□□□□ 0.33
CBWD3-204ENST00000377349 WDR75Q8IWA0 830 aaKnown RBP17.14■□□□□ 0.33
CBWD3-204ENST00000377349 ZNF527Q8NB42 609 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 OR5D16Q8NGK9 328 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms