RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 OR13H1Q8NG92 308 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ELSPBP1Q96BH3 223 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 PRDM4Q9UKN5 801 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 B3GALT1Q9Y5Z6 326 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 LOC102725191A0A1B0GVB3 256 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 A8MV72 311 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 ABLIM3O94929 683 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 GNAO1P09471 354 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 DCAF7P61962 342 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ADAMTSL4Q6UY14 1074 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ADIPOR2Q86V24 386 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 FAM217AQ8IXS0 508 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 METTL25Q8N6Q8 603 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 TBC1D15Q8TC07 691 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 BPIFA2Q96DR5 249 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 SMOXQ9NWM0 555 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 HSPE1-MOB4S4R3N1 261 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 C12orf71A8MTZ7 269 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 CTHP32929 405 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 MAGEA3P43357 314 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 GPR18Q14330 331 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 RETP07949 1114 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ENTPD8Q5MY95 495 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 C6orf89Q6UWU4 347 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 MMP21Q8N119 569 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ZNF420Q8TAQ5 688 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 PRRC1Q96M27 445 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 DHCR7Q9UBM7 475 aaKnown RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 CARD8Q9Y2G2 431 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 ST14Q9Y5Y6 855 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 CHRM4P08173 479 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 OR1D5P58170 312 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 FXYD4P59646 89 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 RACK1P63244 317 aaKnown RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 TSPYL5Q86VY4 417 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 CSNK2A3Q8NEV1 391 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 CD300LFQ8TDQ1 290 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 RRNAD1Q96FB5 475 aaKnown RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
GPC6-201ENST00000377047 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
GPC6-201ENST00000377047 PPP6CO00743 305 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 LRRTM2O43300 516 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 RAB3AP20336 220 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 TNFRSF17Q02223 184 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 DMWDQ09019 674 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 RSC1A1Q92681 617 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 MUCL1Q96DR8 90 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 INTS14Q96SY0 518 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 MYH4Q9Y623 1939 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 A0A0A6YYH2 397 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 DCDC2BA2VCK2 349 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 A6NJ64 397 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.36
GPC6-201ENST00000377047 H2AFB2P0C5Z0 115 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 FNTBP49356 437 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 INHBCP55103 352 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 VHLLQ6RSH7 139 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 RTN4RL1Q86UN2 441 aaPredicted RBP12.77□□□□□ -0.36
GPC6-201ENST00000377047 SPAG16Q8N0X2 631 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 PPP1R35Q8TAP8 253 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 FER1L6-AS2Q96M78 137 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.36
GPC6-201ENST00000377047 ZNF337Q9Y3M9 751 aa12.77□□□□□ -0.36
GPC6-201ENST00000377047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.77□□□□□ -0.37
GPC6-201ENST00000377047 G3V3Y1 287 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 ATG12O94817 140 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 BDH1Q02338 343 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 VEZF1Q14119 521 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 MBTPS1Q14703 1052 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 OR1Q1Q15612 314 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.37
GPC6-201ENST00000377047 PLCXD3Q63HM9 321 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 OR5W2Q8NH69 310 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 ZNF300Q96RE9 604 aaPredicted RBP12.77□□□□□ -0.37
GPC6-201ENST00000377047 OBP2BQ9NPH6 170 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 OBP2AQ9NY56 170 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 VAPAQ9P0L0 249 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 TVP23AA6NH52 213 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 PRKYO43930 277 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 KCNK5O95279 499 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 MPIG6BO95866 241 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 KLKB1P03952 638 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 GPX3P22352 226 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 PBX2P40425 430 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 LRRC18Q8N456 261 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 LKAAEAR1Q8TD35 194 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 LGALS12Q96DT0 336 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.37
GPC6-201ENST00000377047 SLC6A5Q9Y345 797 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms