RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 GDF7Q7Z4P5 450 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CCDC28AQ8IWP9 274 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 BOLLQ8N9W6 283 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LINC01555Q8NAE3 123 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CEP76Q8TAP6 659 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 METTL2AQ96IZ6 378 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MSLNLQ96KJ4 702 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR52A5Q9H2C5 316 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CCDC86Q9H6F5 360 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SYNPO2LQ9H987 977 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 A4GALTQ9NPC4 353 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 BABAM2Q9NXR7 383 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SERGEFQ9UGK8 458 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MAU2Q9Y6X3 613 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 A3GALT2U3KPV4 340 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PTPRDP23468 1912 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PROS1P07225 676 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GABRB1P18505 474 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 EPHA5P54756 1037 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DUSP2Q05923 314 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 KIF18BQ86Y91 864 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FTMTQ8N4E7 242 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FAM26EQ8N5C1 309 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TNFRSF13CQ96RJ3 184 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 VCANP13611 3396 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 A0A1W2PRQ8 180 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 STK25O00506 426 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 KDM4BO94953 1096 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RCBTB2O95199 551 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OLFM2O95897 454 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LGI1O95970 557 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MAS1P04201 325 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PRKCAP17252 672 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RAB3BP20337 219 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FNTBP49356 437 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 E2F1Q01094 437 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RASSF6Q6ZTQ3 369 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TAF8Q7Z7C8 310 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TMED4Q7Z7H5 227 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SIRT6Q8N6T7 355 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR4Q3Q8NH05 313 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GHSRQ92847 366 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 BPIFA2Q96DR5 249 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MRGPRX3Q96LB0 322 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RAD9AQ99638 391 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ACTRT3Q9BYD9 372 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 IL21RQ9HBE5 538 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SIRT3Q9NTG7 399 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 HCN3Q9P1Z3 774 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PLEKHB1Q9UF11 243 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 STON1Q9Y6Q2 735 aa13.42□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MED12Q93074 2177 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 F8A1P23610 371 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GBX2P52951 348 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ERVK-21P61565 698 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ASPGQ86U10 573 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OR2L5Q8NG80 312 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 COQ8AQ8NI60 647 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 THEM6Q8WUY1 208 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FGF13Q92913 245 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ELP4Q96EB1 424 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TCF7L1Q9HCS4 588 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FBXO34Q9NWN3 711 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PRAMEF27A3QJZ7 478 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TMEM229AB2RXF0 380 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 C11orf98E9PRG8 122 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PLA2G10O15496 165 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ZNF10P21506 573 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PITPNBP48739 271 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 GPR176Q14439 515 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PON3Q15166 354 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DUSP5Q16690 384 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ALG10BQ5I7T1 473 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 FAM78AQ5JUQ0 283 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TTLQ8NG68 377 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 BADQ92934 168 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MICU1Q9BPX6 476 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 PINK1Q9BXM7 581 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TMEM5Q9Y2B1 443 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 IER3IP1Q9Y5U9 82 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 TVP23AA6NH52 213 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 E9PI62 339 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 H7C1C5 153 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 CRYZL1O95825 349 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SEMG1P04279 462 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 DDOSTP39656 456 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 OMPP47874 163 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 RRAS2P62070 204 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 LCN6P62502 163 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 EFR3AQ14156 821 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 SLC25A35Q3KQZ1 300 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 C3orf38Q5JPI3 329 aa13.41□□□□□ -0.26
TNFRSF1B-201ENST00000376259 ZNF676Q8N7Q3 588 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms