RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 OR3A3P47888 321 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 OR3A2P47893 321 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ELAVL3Q14576 367 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ARHGAP40Q5TG30 622 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 STX12Q86Y82 276 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 KIF18BQ86Y91 864 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF584Q8IVC4 421 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TCEAL8Q8IYN2 117 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 FAM109AQ8N4B1 249 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM239Q8WW34 195 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CHFRQ96EP1 664 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 WDR77Q9BQA1 342 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 G6PC3Q9BUM1 346 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 MTHFD2LQ9H903 347 aaPredicted RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 SIRT5Q9NXA8 310 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 IL1AP01583 271 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SFTPBP07988 381 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CLUP10909 449 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 JUNDP17535 347 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 NDUFS1P28331 727 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CHRNEQ04844 493 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ARFRP1Q13795 201 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 C1orf189Q5VU69 101 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GDPD3Q7L5L3 318 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 OR52R1Q8NGF1 315 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SFXN5Q8TD22 340 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ISG20Q96AZ6 181 aaKnown RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CREBZFQ9NS37 354 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 RALGAPA2Q2PPJ7 1873 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 BMP1P13497 986 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PUS10Q3MIT2 529 aaKnown RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SLC16A12Q6ZSM3 486 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF550Q7Z398 422 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM17Q86X19 198 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 OR2T35Q8NGX2 323 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 OR52D1Q9H346 318 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PRDM9Q9NQV7 894 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 WDR90Q96KV7 1748 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 A0A0B4J203 849 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 FOXE1O00358 373 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 FZD7O75084 574 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ITGA5P08648 1049 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CD34P28906 385 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SHC1P29353 583 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 BCL6P41182 706 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 IRF5Q13568 498 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GRK1Q15835 563 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 DGLUCYQ7Z3D6 616 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PLA2G15Q8NCC3 412 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 C7orf34Q96L11 122 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SLC6A17Q9H1V8 727 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ACER3Q9NUN7 267 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM184CQ9NVA4 438 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 F5H5P2 479 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 RBBP9O75884 186 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 NRG3P56975 720 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 BBS1Q8NFJ9 593 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 OR5K2Q8NHB8 316 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 LGALS14Q8TCE9 139 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 BADQ92934 168 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 KCNN1Q92952 543 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 FBXO8Q9NRD0 319 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 C14orf166Q9Y224 244 aaKnown RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 NAALAD2Q9Y3Q0 740 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 TTC3P53804 2025 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 LTBP1Q14766 1721 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 A0A0A6YYJ9 748 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CENPBD1B2RD01 187 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 H0YIV9 168 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 RDH16O75452 317 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 IGLV3-27P01718 113 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PVRP15151 417 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ERV3-1Q14264 604 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PLK5Q496M5 336 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GAREM2Q75VX8 874 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 PTOV1Q86YD1 416 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM41AQ96HV5 264 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 MYADMQ96S97 322 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SERINC2Q96SA4 455 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 INSM2Q96T92 566 aaPredicted RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GXYLT2A0PJZ3 443 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SLC2A5P22732 501 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 RAB28P51157 221 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ELP2Q6IA86 826 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 FBXO42Q6P3S6 717 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 APOOLQ6UXV4 268 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF767PQ75MW2 155 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 BEST3Q8N1M1 668 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 SLC25A46Q96AG3 418 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ARRDC3Q96B67 414 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 BPIFA2Q96DR5 249 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ASIC5Q9NY37 505 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 HMGN4O00479 90 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 AMY2AP04746 511 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 P2RY2P41231 377 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GPR143P51810 404 aa6.13□□□□□ -1.43
SMC1A-202ENST00000375340 EIF2B1Q14232 305 aaKnown RBP6.13□□□□□ -1.43
SMC1A-202ENST00000375340 GRM7Q14831 915 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms