RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 OR2T27Q8NH04 317 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 DYRK2Q92630 601 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 HERPUD2Q9BSE4 406 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MCOLN1Q9GZU1 580 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 FBXO24O75426 580 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ARP10275 920 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ADARB1P78563 741 aaKnown RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 FAM182AQ5T1J6 154 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PLPPR4Q7Z2D5 763 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 UBE3DQ7Z6J8 389 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SULF2Q8IWU5 870 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GALNT16Q8N428 558 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 OR8U1Q8NH10 309 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 OR5AK2Q8NH90 309 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 C16orf78Q8WTQ4 265 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SIGLEC10Q96LC7 697 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 RAB22AQ9UL26 194 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MMP24Q9Y5R2 645 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GPATCH8Q9UKJ3 1502 aaKnown RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 OR2A25A4D2G3 310 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 TAS2R60P59551 318 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 NOXRED1Q6NXP6 359 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ALG12Q9BV10 488 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 KIAA1522Q9P206 1035 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 HEG1Q9ULI3 1381 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CYR61O00622 381 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PLSCR1O15162 318 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 FOLR1P15328 257 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 IL10RBQ08334 325 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GDPD4Q6W3E5 623 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 REC114Q7Z4M0 266 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 Q8N9G6 341 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 RAB7BQ96AH8 199 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ZNF426Q9BUY5 554 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ZNF552Q9H707 407 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 TTC24A2A3L6 582 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 ZNF888P0CJ79 500 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 TLE1Q04724 770 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MFSD13AQ14CX5 517 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CILP2Q8IUL8 1156 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 BANF2Q9H503 90 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PLRG1O43660 514 aaKnown RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 GALTP07902 379 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 OR5H8P0DN80 308 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 NQO2P16083 231 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SSR2P43308 183 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MAXP61244 160 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 NINJ1Q92982 152 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CD8B2A6NJW9 211 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 DNPH1O43598 174 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CD8BP10966 210 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 DTYMKP23919 212 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 KLF1Q13351 362 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 FAM209BQ5JX69 171 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SLC27A1Q6PCB7 646 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PMM1Q92871 262 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SRPK3Q9UPE1 567 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 LOC390937A0A1W2PQ73 354 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ZBTB7AO95365 584 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 BDH1Q02338 343 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PM20D1Q6GTS8 502 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 TXNRD3Q86VQ6 643 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MARVELD1Q9BSK0 173 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 G6PC3Q9BUM1 346 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GAL3ST2Q9H3Q3 398 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 POLMQ9NP87 494 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 CRTAC1Q9NQ79 661 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 TGIF2-C20orf24A0A0A6YYL0 155 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CXorf65A6NEN9 183 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GCGP01275 180 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SPATA31C1P0DKV0 1188 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PCSK6P29122 969 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GDNFP39905 211 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 DOK7Q18PE1 504 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 FIGNL1Q6PIW4 674 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SP8Q8IXZ3 490 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 IFI44Q8TCB0 444 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 TSLPQ969D9 159 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MRIQ9BWK5 157 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SPACA1Q9HBV2 294 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SIX2Q9NPC8 291 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 GPR173Q9NS66 373 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 MUTYHQ9UIF7 546 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 HIST3H3Q16695 136 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 PNPLA2Q96AD5 504 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 BACE2Q9Y5Z0 518 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CRYABP02511 175 aaKnown RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 NCBP2P52298 156 aaKnown RBP eCLIP6.25□□□□□ -1.416e-6■■■■■ 27.5
UBR4-204ENST00000375254 TUSC3Q13454 348 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CTF1Q16619 201 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 FAM74A3Q4VXF1 159 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 KIAA0907Q7Z7F0 614 aaPredicted RBP6.25□□□□□ -1.41
UBR4-204ENST00000375254 TTPALQ9BTX7 342 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ACTL8Q9H568 366 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 RAB18Q9NP72 206 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 SLCO3A1Q9UIG8 710 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 ACOT8O14734 319 aa6.25□□□□□ -1.41
UBR4-204ENST00000375254 CALCBP10092 127 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms