RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 AZGP1P25311 298 aaKnown RBP14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 BLKP51451 505 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 ZMAT1Q5H9K5 638 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 C3orf38Q5JPI3 329 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 LAPTM4BQ86VI4 370 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 GATAD2AQ86YP4 633 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 ARHGEF39Q8N4T4 335 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 SIRT6Q8N6T7 355 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 MMABQ96EY8 250 aaPredicted RBP14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 FOLH1BQ9HBA9 442 aa14.8□□□□□ -0.04
CNKSR1-202ENST00000374253 UNC13CQ8NB66 2214 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 HYKKA2RU49 373 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 LYPD3O95274 346 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SLC35E2P0CK97 266 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SPNP16150 400 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SLC16A1P53985 500 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 CRTC2Q53ET0 693 aaPredicted RBP14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 KLHL12Q53G59 568 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 EXOSC6Q5RKV6 272 aaKnown RBP14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 LAX1Q8IWV1 398 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 CADM3Q8N126 398 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 CADM2Q8N3J6 435 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 NR4A3Q92570 626 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SECISBP2Q96T21 854 aaKnown RBP14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 STACQ99469 402 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SMURF1Q9HCE7 757 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 MEPEQ9NQ76 525 aaPredicted RBP14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 FLRT3Q9NZU0 649 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 CBLCQ9ULV8 474 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 PEX16Q9Y5Y5 336 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 IGHV5-51A0A0C4DH38 117 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 PROS1P07225 676 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 TNFSF8P32971 234 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 MAP3K8P41279 467 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SLC1A3P43003 542 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SPANXN2Q5MJ10 180 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 LMF1Q96S06 567 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 CD180Q99467 661 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 TMED9Q9BVK6 235 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 TBC1D17Q9HA65 648 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 ZNF223Q9UK11 482 aaPredicted RBP14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 SATB2Q9UPW6 733 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 PCDHGB6Q9Y5F9 930 aa14.79□□□□□ -0.04
CNKSR1-202ENST00000374253 HEATR5AQ86XA9 2040 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 LINC00854A0A1B0GVQ3 168 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 ZNF670-ZNF695F2Z2N8 137 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 SSX4O60224 188 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 DLGAP3O95886 979 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 MYF5P13349 255 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 CPEP16870 476 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 ENDOUP21128 410 aaKnown RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 SDC2P34741 201 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 HNRNPA0Q13151 305 aaKnown RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 MANEAQ5SRI9 462 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 PRAMEF17Q5VTA0 474 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 NPSR1Q6W5P4 371 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 CXXC5Q7LFL8 322 aaKnown RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 CYB561A3Q8NBI2 242 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 NLGN4YQ8NFZ3 816 aaPredicted RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 BPIFA2Q96DR5 249 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 IFT27Q9BW83 186 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 YIPF2Q9BWQ6 316 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 SPRTNQ9H040 489 aaPredicted RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 FGF20Q9NP95 211 aaPredicted RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 H2AFY2Q9P0M6 372 aaPredicted RBP14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 ERVK-19Q9WJR5 959 aa14.78□□□□□ -0.04
CNKSR1-202ENST00000374253 SNTNA6NMZ2 147 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 LRRN3E7EW58 273 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 TAF4O00268 1085 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 DVL2O14641 736 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 REM1O75628 298 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 NKX2-2O95096 273 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 IFNA16P05015 189 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 NGFRP08138 427 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 MRPL3P09001 348 aaKnown RBP14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 CLUP10909 449 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 SRFP11831 508 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 CD38P28907 300 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 CAPZBP47756 277 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 PRTGQ2VWP7 1150 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 RCBTB1Q8NDN9 531 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 HDHD5Q9BXW7 423 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 PRRG3Q9BZD7 231 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 LRRN3Q9H3W5 708 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 ISG20L2Q9H9L3 353 aaKnown RBP14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 SACM1LQ9NTJ5 587 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 UCKL1Q9NWZ5 548 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 LRIT1Q9P2V4 623 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 FBXL4Q9UKA2 621 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 WDFY4Q6ZS81 3184 aa14.77□□□□□ -0.04
CNKSR1-202ENST00000374253 LOC110117498-PIK3R3F6TDL0 507 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 CSF2P04141 144 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 GYPBP06028 91 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 MSL3P1P0C860 447 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 RNH1P13489 461 aaKnown RBP14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 CELP19835 753 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 TBXA2RP21731 343 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 FABP5Q01469 135 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 PRKCDQ05655 676 aa14.77□□□□□ -0.05
CNKSR1-202ENST00000374253 GHDCQ8N2G8 530 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms