RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 NRGNQ92686 78 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 SH3YL1Q96HL8 342 aaPredicted RBP16.97■□□□□ 0.31
TMEM53-201ENST00000372235 RNF145Q96MT1 663 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 MED18Q9BUE0 208 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 NMUR2Q9GZQ4 415 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 KCNK9Q9NPC2 374 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 PLSCR4Q9NRQ2 329 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 HAO1Q9UJM8 370 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 DTNAQ9Y4J8 743 aa16.97■□□□□ 0.31
TMEM53-201ENST00000372235 ANKHD1Q8IWZ3 2542 aaKnown RBP16.96■□□□□ 0.31
TMEM53-201ENST00000372235 WDR91A4D1P6 747 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 EIF4E2O60573 245 aaKnown RBP16.96■□□□□ 0.31
TMEM53-201ENST00000372235 CGAP01215 116 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 HRGP04196 525 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 DHRS4L1P0CG22 281 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 MATN1P21941 496 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 SOAT1P35610 550 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 UGT2B10P36537 528 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 HBA1P69905 142 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 SIRPAP78324 504 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 LRRC74AQ0VAA2 488 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 STX3Q13277 289 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 GUSBP1Q15486 140 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 HBMQ6B0K9 141 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 PPP4R4Q6NUP7 873 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 LILRA2Q8N149 483 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 TOR1AIP2Q8NFQ8 470 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 CPNE4Q96A23 557 aaPredicted RBP16.96■□□□□ 0.31
TMEM53-201ENST00000372235 TESCQ96BS2 214 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 AKTIPQ9H8T0 292 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 PLEKHF2Q9H8W4 249 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.96■□□□□ 0.31
TMEM53-201ENST00000372235 PLEKHA6Q9Y2H5 1048 aa16.96■□□□□ 0.31
TMEM53-201ENST00000372235 V9GYY5 206 aaPredicted RBP16.96■□□□□ 0.31
TMEM53-201ENST00000372235 PRSS51A0A1B0GVH4 220 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 H0YC42 278 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 SS18L1O75177 396 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 STX11O75558 287 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 GUSBP08236 651 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 LINGO3P0C6S8 592 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 CD99P14209 185 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 LBPP18428 481 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 PSMA4P25789 261 aaKnown RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 TPD52P55327 224 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 CARD18P57730 90 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 TXNL4AP83876 142 aaKnown RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 FAM27E3Q08E93 113 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 RNPS1Q15287 305 aaKnown RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 TNFAIP8L3Q5GJ75 292 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 ATAD3BQ5T9A4 648 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 ZNF474Q6S9Z5 364 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 BEND4Q6ZU67 534 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 ZAR1Q86SH2 424 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 MED12LQ86YW9 2145 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 TGIF2LYQ8IUE0 185 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 ADGRG7Q96K78 797 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 MRGPRX4Q96LA9 322 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 KLHL15Q96M94 604 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 OR7D2Q96RA2 312 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 TACO1Q9BSH4 297 aaKnown RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 OPN3Q9H1Y3 402 aaPredicted RBP16.95■□□□□ 0.3
TMEM53-201ENST00000372235 GP6Q9HCN6 339 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 POLE3Q9NRF9 147 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 FBXO34Q9NWN3 711 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 TACC2O95359 2948 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 MED12Q93074 2177 aa16.95■□□□□ 0.3
TMEM53-201ENST00000372235 ZNF264O43296 627 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 ITM2AO43736 263 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 ZNF117Q03924 483 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 CBFBQ13951 182 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 CD226Q15762 336 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 DEFB113Q30KQ7 82 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 HHATQ5VTY9 493 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 C6orf120Q7Z4R8 191 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 OR4A15Q8NGL6 344 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 MIPOL1Q8TD10 442 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 OTUB1Q96FW1 271 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-201ENST00000372235 SLC35G5Q96KT7 338 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 SDF2Q99470 211 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 OR10A4Q9H209 315 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 BEX4Q9NWD9 120 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-201ENST00000372235 ICAM5Q9UMF0 924 aa16.94■□□□□ 0.3
TMEM53-201ENST00000372235 CCDC168Q8NDH2 2452 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 RNF103-CHMP3A0A140T963 221 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 SHISA8B8ZZ34 492 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 SLCO1B7G3V0H7 640 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 TNFSF11O14788 317 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 CXCL13O43927 109 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 AQP8O94778 261 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 ATE1O95260 518 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 UBL4AP11441 157 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 UQCRC2P22695 453 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 CRYGSP22914 178 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 ANXA11P50995 505 aaKnown RBP16.93■□□□□ 0.3
TMEM53-201ENST00000372235 SELENBP1Q13228 472 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 CTU2Q2VPK5 515 aaKnown RBP16.93■□□□□ 0.3
TMEM53-201ENST00000372235 ARHGAP11BQ3KRB8 267 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 OR4F3Q6IEY1 312 aa16.93■□□□□ 0.3
TMEM53-201ENST00000372235 C16orf62Q7Z3J2 963 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms