RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TP63Q9H3D4 680 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-204ENST00000370496 PNPLA3Q9NST1 481 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 GID8Q9NWU2 228 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 SUCOQ9UBS9 1254 aaKnown RBP13.46□□□□□ -0.25
COL9A1-204ENST00000370496 ADAM21Q9UKJ8 722 aa13.46□□□□□ -0.25
COL9A1-204ENST00000370496 FASNP49327 2511 aaKnown RBP13.46□□□□□ -0.26
COL9A1-204ENST00000370496 DSPPQ9NZW4 1301 aa13.46□□□□□ -0.26
COL9A1-204ENST00000370496 A0A087WZY1 265 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 AGAP5A6NIR3 686 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 FXYD1O00168 92 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CCL21O00585 134 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 OIP5O43482 229 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ACTL6AO96019 429 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 NPPAP01160 153 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 DBIP07108 87 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 IL7RP16871 459 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 GPX2P18283 190 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 P2RX1P51575 399 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PER3P56645 1201 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CDK6Q00534 326 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CRYZQ08257 329 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 SKP2Q13309 424 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CBFBQ13951 182 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 SCARB2Q14108 478 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 MAPK11Q15759 364 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 LIN52Q52LA3 116 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PRAMEF8Q5VWM4 474 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PRAMEF7Q5VXH5 474 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF585AQ6P3V2 769 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CBLN3Q6UW01 205 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ENPP6Q6UWR7 440 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ARSKQ6UWY0 536 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 TREML1Q86YW5 311 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 FAM26EQ8N5C1 309 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 TOR1AIP2Q8NFQ8 470 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PMM1Q92871 262 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ABTB1Q969K4 478 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ZBTB8AQ96BR9 441 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CMTM5Q96DZ9 223 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 LRRC37BQ96QE4 947 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 SH3GL1Q99961 368 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PIGQQ9BRB3 760 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 UGT2B28Q9BY64 529 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 MTHFD2LQ9H903 347 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CAMK2AQ9UQM7 478 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ANGPT4Q9Y264 503 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 MRPS18CQ9Y3D5 142 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 TENM4Q6N022 2769 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 GTF3C1Q12789 2109 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 HIVEP3Q5T1R4 2406 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 A0A0G2JPF8 293 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 HNRNPCL3B7ZW38 293 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 AIM2O14862 343 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 EIF4E2O60573 245 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 SEMA7AO75326 666 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 HNRNPCL4P0DMR1 293 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF17P17021 662 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 BMP7P18075 431 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 POU3F2P20265 443 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 RPS4Y1P22090 263 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 SLC6A2P23975 617 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 NUDT2P50583 147 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 LARS2Q15031 903 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PLPPR5Q32ZL2 321 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 NHSL2Q5HYW2 709 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 DCST1Q5T197 706 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 VASNQ6EMK4 673 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 NANOGP8Q6NSW7 305 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 KRT73Q86Y46 540 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 DOLPP1Q86YN1 238 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 CMIPQ8IY22 773 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 PM20D2Q8IYS1 436 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 METTL25Q8N6Q8 603 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 C11orf65Q8NCR3 313 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 OR8J3Q8NGG0 315 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 OR5M1Q8NGP8 315 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 OR52P1PQ8NH57 321 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 TMEM38AQ9H6F2 299 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 KAT8Q9H7Z6 458 aaKnown RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 MED17Q9NVC6 651 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ALKBH4Q9NXW9 302 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ERRFI1Q9UJM3 462 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ICAM5Q9UMF0 924 aa13.45□□□□□ -0.26
COL9A1-204ENST00000370496 ZNF443Q9Y2A4 671 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-204ENST00000370496 POLEQ07864 2286 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 CLDN24A6NM45 220 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 SHISA8B8ZZ34 492 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 H0Y3Z8 333 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 H3BML4 177 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 ZIC3O60481 467 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 WDR1O75083 606 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 NID1P14543 1247 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 CHMP24386 653 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 ACVR2AP27037 513 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 ADH7P40394 386 aa13.44□□□□□ -0.26
COL9A1-204ENST00000370496 GFRA1P56159 465 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms