RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 LIMS1P48059 325 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 GPR143P51810 404 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 EMP2P54851 167 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 MYBPC1Q00872 1141 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 SPIBQ01892 262 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 PPP1R8Q12972 351 aaKnown RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 GPR68Q15743 365 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.14□□□□□ -0.63
USF1-203ENST00000368021 RFX4Q33E94 735 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 LCN10Q6JVE6 187 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 KRT80Q6KB66 452 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 FIGNL1Q6PIW4 674 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 SHISA6Q6ZSJ9 500 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 HS3ST5Q8IZT8 346 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ZSCAN1Q8NBB4 408 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 C17orf47Q8NEP4 570 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 OR4D11Q8NGI4 311 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 NR4A3Q92570 626 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ISOC1Q96CN7 298 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 TAAR9Q96RI9 348 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 BCL7BQ9BQE9 202 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 EVA1AQ9H8M9 152 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ACER3Q9NUN7 267 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 FBXO34Q9NWN3 711 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 C3orf18Q9UK00 162 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 TESMINQ9Y4I5 508 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 B3GALT1Q9Y5Z6 326 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 FRG2CA6NGY1 282 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 C9J4A7 227 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 J3KTA2 159 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 TAF4O00268 1085 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 FFAR1O14842 300 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 SEMA7AO75326 666 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 UGT2B17O75795 530 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 CD63P08962 238 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ATP6V1B1P15313 513 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 DRD5P21918 477 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 YAP1P46937 504 aaKnown RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 PSMD4P55036 377 aaKnown RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 SMIM11AP58511 58 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 EEF1A1P68104 462 aaKnown RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 PSPHP78330 225 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 MERTKQ12866 999 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 EBPQ15125 230 aaKnown RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 ZSWIM7Q19AV6 140 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 FLYWCH1Q4VC44 716 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 COLEC12Q5KU26 742 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 C6orf52Q5T4I8 152 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 TMEM205Q6UW68 189 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 FAM198BQ6UWH4 519 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ZNF321PQ8N8H1 164 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 OR4N2Q8NGD1 307 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 OR6T1Q8NGN1 323 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 VANGL1Q8TAA9 524 aaPredicted RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 ADIPOR1Q96A54 375 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 LCORQ96JN0 433 aaPredicted RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 WFDC6Q9BQY6 131 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 CRB3Q9BUF7 120 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 ADI1Q9BV57 179 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 SEMA4CQ9C0C4 833 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 MARCH7Q9H992 704 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 PDP1Q9P0J1 537 aaPredicted RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 C19orf25Q9UFG5 118 aaPredicted RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 GPN3Q9UHW5 284 aaPredicted RBP11.14□□□□□ -0.63
USF1-203ENST00000368021 RAXQ9Y2V3 346 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 OR10H1Q9Y4A9 318 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 TEX51A0A1B0GUA7 166 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 ARRDC5A6NEK1 342 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 SAGE2PA6NJ88 616 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 NPIPB9F8W1W9 429 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 H0YAE9 185 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 H3BNH8 94 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 M0R3H8 397 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 PCDH17O14917 1159 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 GADD45GO95257 159 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 THRBP10828 461 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 CTRB1P17538 263 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 TMBIM6P55061 237 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 CDH12P55289 794 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 MAPK14Q16539 360 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 DECR1Q16698 335 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 KDM4DQ6B0I6 523 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 FAHD1Q6P587 224 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 DEF8Q6ZN54 512 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 ZNF836Q6ZNA1 936 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
USF1-203ENST00000368021 SLC29A4Q7RTT9 530 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 HMGN2P46Q86SG4 172 aa11.13□□□□□ -0.63
USF1-203ENST00000368021 RBM45Q8IUH3 476 aaKnown RBP11.13□□□□□ -0.63
USF1-203ENST00000368021 LURAP1LQ8IV03 231 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms