RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CSF2P04141 144 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CHRM4P08173 479 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 NUDT7P0C024 238 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 TMEM176BQ3YBM2 270 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 IQCF1Q8N6M8 205 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CYB561A3Q8NBI2 242 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 OR1N1Q8NGS0 311 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 PKMYT1Q99640 499 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 WDR83Q9BRX9 315 aaKnown RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 GPR52Q9Y2T5 361 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 SPEF1Q9Y4P9 236 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 MYH9P35579 1960 aaKnown RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 BPNT1O95861 308 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 HERV-K104P61576 105 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 GALNT11Q8NCW6 608 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 C8orf44Q96CB5 159 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF442Q9H7R0 627 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 GORASP2Q9H8Y8 452 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 MAST2Q6P0Q8 1798 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 TEX13DA0A0J9YY54 714 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 VAMP1P23763 118 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 RFC3P40938 356 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF791Q3KP31 576 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 C4orf46Q504U0 113 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 FAM111BQ6SJ93 734 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 TMED4Q7Z7H5 227 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 FTMTQ8N4E7 242 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF615Q8N8J6 731 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 OR13C3Q8NGS6 347 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 ZNF420Q8TAQ5 688 aaPredicted RBP10.84□□□□□ -0.67
SYNE1-204ENST00000367248 RSC1A1Q92681 617 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 COQ10AQ96MF6 247 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 SEMA6CQ9H3T2 930 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 MEMO1Q9Y316 297 aa10.84□□□□□ -0.67
SYNE1-204ENST00000367248 L7N2F9 121 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MPPED1O15442 326 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 PSKH1P11801 424 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MAOAP21397 527 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MPLP40238 635 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 VAMP2P63027 116 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 HNRNPA0Q13151 305 aaKnown RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MZB1Q8WU39 189 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ZFPM2Q8WW38 1151 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 FAM71F1Q96KD3 344 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 PAPPA2Q9BXP8 1791 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 TRBV2A0A0J9YWF9 115 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 FZD6O60353 706 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 RLN2P04090 185 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CD53P19397 219 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SOX3P41225 446 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SLC19A1P41440 591 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 HLA-BQ31612 363 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF613Q6PF04 617 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF782Q6ZMW2 699 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MRPL21Q7Z2W9 205 aaKnown RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 REV1Q9UBZ9 1251 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 TBC1D29Q9UFV1 150 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SLC1A7O00341 560 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 TSFMP43897 325 aaKnown RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 PFN3P60673 137 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF829Q3KNS6 432 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SLC18B1Q6NT16 456 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 TRIM46Q7Z4K8 759 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 OR8J2Q8NGG1 315 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 DUSP19Q8WTR2 217 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CPPED1Q9BRF8 314 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 C1QTNF6Q9BXI9 259 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF160Q9HCG1 818 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ENAMQ9NRM1 1142 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 GPR83Q9NYM4 423 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CARD8Q9Y2G2 431 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ADAM18Q9Y3Q7 739 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CENPBD1B2RD01 187 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 OR5M1Q8NGP8 315 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 BPIFA2Q96DR5 249 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 USP54Q70EL1 1684 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 THSD7AQ9UPZ6 1657 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 A0A1W2PPC4 97 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CLCA1A8K7I4 914 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 DLGAP1O14490 977 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 BCL6P41182 706 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CSNK2A1P68400 391 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SHFQ7M4L6 423 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 LIMS2Q7Z4I7 341 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 CDH24Q86UP0 819 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 PAQR7Q86WK9 346 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 C1orf210Q8IVY1 113 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SAMD12Q8N8I0 201 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 ZNF548Q8NEK5 533 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 VSX1Q9NZR4 365 aaPredicted RBP10.83□□□□□ -0.68
SYNE1-204ENST00000367248 SLAMF8Q9P0V8 285 aa10.83□□□□□ -0.68
SYNE1-204ENST00000367248 MMACHCQ9Y4U1 282 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms