RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ALG14Q96F25 216 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 AHCYL2Q96HN2 611 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 LMLNQ96KR4 655 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 NECAB3Q96P71 396 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF559Q9BR84 538 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR51J1Q9H342 316 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 Q9N2J8 555 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 ADAP2Q9NPF8 381 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM86C1Q9NVL1 165 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 FBXL12Q9NXK8 326 aa5.05□□□□□ -1.6
CDC42BPA-204ENST00000366767 K7EPK0 472 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TRAPPC2P0DI81 140 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TRAPPC2BP0DI82 140 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACP2P11117 423 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ALAS2P22557 587 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTR1BP42025 376 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TGM4P49221 684 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRKXP51817 358 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTR1AP61163 376 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTA2P62736 377 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTG2P63267 376 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CDC20Q12834 499 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CHAF1BQ13112 559 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC22A10Q63ZE4 541 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CEP68Q76N32 757 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM129CQ86XR2 697 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM71E2Q8N5Q1 922 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PAQR8Q8TEZ7 354 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACOT11Q8WXI4 607 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MYLIPQ8WY64 445 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TANKQ92844 425 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CDCA3Q99618 268 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 G6PC3Q9BUM1 346 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MS4A8Q9BY19 250 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC6A16Q9GZN6 736 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 LRFN1Q9P244 771 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SPTBP11277 2137 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SCN2BO60939 215 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SULT1C4O75897 302 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 NAT2P11245 290 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 M6PRP20645 277 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MMP12P39900 470 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 GPR143P51810 404 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 REEP5Q00765 189 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 OXA1LQ15070 435 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TMEM69Q5SWH9 247 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 GAREM2Q75VX8 874 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PARP16Q8N5Y8 322 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM86B1Q8N7N1 296 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF676Q8N7Q3 588 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TMEM163Q8TC26 289 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM110BQ8TC76 370 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 WFDC5Q8TCV5 224 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 HERVK_113Q902F9 699 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PDXPQ96GD0 296 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 IL17FQ96PD4 163 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 YIPF4Q9BSR8 244 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SGPP1Q9BX95 441 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 HDAC8Q9BY41 377 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 IL21Q9HBE4 155 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 POLMQ9NP87 494 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 POT1Q9NUX5 634 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 LOC285556D6RIA3 1793 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MTCL1Q9Y4B5 1905 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CCDC85CA6NKD9 419 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 HEPACAM2A8MVW5 462 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 GPR39O43194 453 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 RENP00797 406 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 WASP42768 502 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 KCNJ10P78508 379 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PUM1Q14671 1186 aaKnown RBP eCLIP5.04□□□□□ -1.62e-6■■□□□ 11.9
CDC42BPA-204ENST00000366767 MINDY4Q4G0A6 757 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 LHX8Q68G74 356 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 VRK3Q8IV63 474 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 LRRC56Q8IYG6 542 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF563Q8TA94 476 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 DGAT2Q96PD7 388 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CACNG6Q9BXT2 260 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SOHLH2Q9NX45 425 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ASB1Q9Y576 335 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 KCNE1BA0A087WTH5 132 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 UNC119BA6NIH7 251 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 APBB3O95704 486 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF8P17098 575 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MAPK3P27361 379 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 POLR2IP36954 125 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 XCR1P46094 333 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRDX1Q06830 199 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 C21orf62-AS1Q17RA5 79 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC5A12Q1EHB4 618 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 IGSF11Q5DX21 431 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 C3orf38Q5JPI3 329 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TMEM173Q86WV6 379 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR5AR1Q8NGP9 310 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 NANPQ8TBE9 248 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 C16orf58Q96GQ5 468 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CDCA4Q9BXL8 241 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ATG5Q9H1Y0 275 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms