RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 SCN3AQ9NY46 2000 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ZNF593O00488 134 aaPredicted RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 SLC2A10O95528 541 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 SNRPBP14678 240 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 KCNJ5P48544 419 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 VEGFCP49767 419 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 KHDRBS2Q5VWX1 349 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 LRFN4Q6PJG9 635 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 LINGO2Q7L985 606 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 STPG2Q8N412 459 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 GCDHQ92947 438 aaPredicted RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ZCCHC3Q9NUD5 404 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 KCMF1Q9P0J7 381 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 A4GNTQ9UNA3 340 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 NTNG1Q9Y2I2 539 aa18.32■□□□□ 0.52
TRIM58-201ENST00000366481 TCF20Q9UGU0 1960 aaKnown RBP18.32■□□□□ 0.52
TRIM58-201ENST00000366481 ZC3H12DA2A288 527 aaKnown RBP18.31■□□□□ 0.52
TRIM58-201ENST00000366481 SOCS6O14544 535 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 RNF13O43567 381 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 SOX30O94993 753 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 SIX6O95475 246 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 ACP5P13686 325 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 GPR4P46093 362 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 ZNF77Q15935 545 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 SLC25A35Q3KQZ1 300 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 SEC22CQ9BRL7 303 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 FXYD6-FXYD2A0A087WZ82 144 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 DAPL1A0PJW8 107 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 H0YC42 278 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 PI15O43692 258 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 F8A1P23610 371 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 LGALS3BPQ08380 585 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 CD200R1LQ6Q8B3 271 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 ARIH2OSQ8N7S6 290 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 IL17RCQ8NAC3 791 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 BBS10Q8TAM1 723 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 C16orf58Q96GQ5 468 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 ARL6Q9H0F7 186 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 FXYD6Q9H0Q3 95 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 KLHL31Q9H511 634 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 POMT2Q9UKY4 750 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 TBX21Q9UL17 535 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 KCNE3Q9Y6H6 103 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 OBSL1O75147 1896 aa18.31■□□□□ 0.52
TRIM58-201ENST00000366481 SLC22A23A1A5C7 686 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 UBXN7O94888 489 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 RB1P06400 928 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 MRPL3P09001 348 aaKnown RBP18.3■□□□□ 0.52
TRIM58-201ENST00000366481 MYOGP15173 224 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 CTNNB1P35222 781 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 AHRP35869 848 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 CPOQ8IVL8 374 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 OR52H1Q8NGJ2 320 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 OR10Z1Q8NGY1 313 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 ZFPM2Q8WW38 1151 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 SMPDL3AQ92484 453 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 RAD51AP1Q96B01 352 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 PLEKHM1Q9Y4G2 1056 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 KRBOX1C9JBD0 128 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 REM1O75628 298 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 SULT1A3P0DMM9 295 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 SULT1A4P0DMN0 295 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 GSTM3P21266 225 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 ACADLP28330 430 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 PSMA6P60900 246 aaKnown RBP18.3■□□□□ 0.52
TRIM58-201ENST00000366481 CDK5Q00535 292 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 CXXC5Q7LFL8 322 aaKnown RBP18.3■□□□□ 0.52
TRIM58-201ENST00000366481 ANKRD33Q7Z3H0 272 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 SLITRK4Q8IW52 837 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 CCDC116Q8IYX3 515 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 TRIM43Q96BQ3 446 aaPredicted RBP18.3■□□□□ 0.52
TRIM58-201ENST00000366481 TMEM168Q9H0V1 697 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 MED20Q9H944 212 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 LHX9Q9NQ69 397 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 WASH6PQ9NQA3 447 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 SIRT3Q9NTG7 399 aaPredicted RBP18.3■□□□□ 0.52
TRIM58-201ENST00000366481 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 RPS6KB2Q9UBS0 482 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 LRRN3E7EW58 273 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 LPLP06858 475 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 ADH5P11766 374 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 ADRB3P13945 408 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 BSGP35613 385 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 FGL2Q14314 439 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 IKBIPQ70UQ0 350 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 PRICKLE2Q7Z3G6 844 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 AMZ2Q86W34 360 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 FAM129CQ86XR2 697 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 LINC00518Q8N0U6 118 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 OR56B4Q8NH76 319 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 LRRN3Q9H3W5 708 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 COPZ2Q9P299 210 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 KCNK6Q9Y257 313 aa18.3■□□□□ 0.52
TRIM58-201ENST00000366481 TRABD2BA6NFA1 517 aa18.29■□□□□ 0.52
TRIM58-201ENST00000366481 ARPC1BO15143 372 aaKnown RBP18.29■□□□□ 0.52
TRIM58-201ENST00000366481 CASC3O15234 703 aaKnown RBP18.29■□□□□ 0.52
TRIM58-201ENST00000366481 PCDH8O95206 1070 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms