RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PSMF1Q92530 271 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 TM9SF4Q92544 642 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 UBE2E3Q969T4 207 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 ATP6V1E2Q96A05 226 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 MS4A6EQ96DS6 147 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 ELP4Q96EB1 424 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 IMMP1LQ96LU5 166 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 FRG2BQ96QU4 278 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 HBEGFQ99075 208 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 MTERF1Q99551 399 aaKnown RBP7.18□□□□□ -1.26
YBX3-204ENST00000366290 BARD1Q99728 777 aaKnown RBP7.18□□□□□ -1.26
YBX3-204ENST00000366290 PAIP2Q9BPZ3 127 aaKnown RBP7.18□□□□□ -1.26
YBX3-204ENST00000366290 ZNF717Q9BY31 904 aaPredicted RBP7.18□□□□□ -1.26
YBX3-204ENST00000366290 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 SLC29A3Q9BZD2 475 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 VN1R1Q9GZP7 353 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 LHPPQ9H008 270 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 TUBB1Q9H4B7 451 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 KLHL13Q9P2N7 655 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 ZDHHC2Q9UIJ5 367 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 NAALAD2Q9Y3Q0 740 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 ZGRF1Q86YA3 2104 aa7.18□□□□□ -1.26
YBX3-204ENST00000366290 ICE1Q9Y2F5 2266 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 URADA6NGE7 173 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ANKDD1BA6NHY2 528 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 A6NL46 340 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 TMEM114B3SHH9 223 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SGK494L7N484 410 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 MASP2O00187 686 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 FOXE1O00358 373 aaPredicted RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 ALOX12BO75342 701 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SH3BGRLO75368 114 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 PDYNP01213 254 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 HLA-DQA2P01906 255 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SERPINA7P05543 415 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SERPIND1P05546 499 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 HEXBP07686 556 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 FHP07954 510 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 PRR35P0CG20 571 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 C8orf89P0DMQ9 161 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ICAM2P13598 275 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 IL1RNP18510 177 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ITGA3P26006 1051 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ABCD3P28288 659 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ARL1P40616 181 aaPredicted RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 XCR1P46094 333 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SLC1A6P48664 564 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 MAT1AQ00266 395 aaKnown RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 STX3Q13277 289 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 DDX39BQ13838 428 aaKnown RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 ABRAXAS2Q15018 415 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 HIST2H2ACQ16777 129 aaPredicted RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 SYT16Q17RD7 645 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 TOR1AIP1Q5JTV8 583 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 AGAP7PQ5VUJ5 663 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 HIST2H2AA3Q6FI13 130 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SCIMPQ6UWF3 145 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ZNF793Q6ZN11 406 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 TMEM217Q8N7C4 229 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ZNF781Q8N8C0 355 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 SCAIQ8N9R8 606 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 METTL6Q8TCB7 284 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 BCAS4Q8TDM0 211 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 CKAP2Q8WWK9 683 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ZNF75CPQ92670 426 aaPredicted RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 AGAP4Q96P64 663 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 QRFPRQ96P65 431 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 F2RL3Q96RI0 385 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 WDR77Q9BQA1 342 aaPredicted RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 TUBB6Q9BUF5 446 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 ACPTQ9BZG2 426 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 OR51B5Q9H339 312 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 INTS9Q9NV88 658 aaKnown RBP7.17□□□□□ -1.26
YBX3-204ENST00000366290 PSD3Q9NYI0 1048 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 STK38LQ9Y2H1 464 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 CCL27Q9Y4X3 112 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 DNAJC15Q9Y5T4 150 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 PTGDR2Q9Y5Y4 395 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 CENPEQ02224 2701 aa7.17□□□□□ -1.26
YBX3-204ENST00000366290 IGKV3D-11A0A0A0MRZ8 115 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 NSG1A0A0A6YYJ2 146 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 A0A0G2JN53 185 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 ZNF860A6NHJ4 632 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 SAP18O00422 153 aaKnown RBP7.16□□□□□ -1.26
YBX3-204ENST00000366290 RTCAO00442 366 aaKnown RBP7.16□□□□□ -1.26
YBX3-204ENST00000366290 PLPP1O14494 284 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 KLF11O14901 512 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 AZIN1O14977 448 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 ERI3O43414 337 aaKnown RBP7.16□□□□□ -1.26
YBX3-204ENST00000366290 RDH16O75452 317 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 SEMA3DO95025 777 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 SCELO95171 688 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 UROSP10746 265 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 FCGR2AP12318 317 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 GP1BBP13224 206 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 JAK1P23458 1154 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 CERS1P27544 350 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 HMOX2P30519 316 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 SERPINB1P30740 379 aa7.16□□□□□ -1.26
YBX3-204ENST00000366290 BSGP35613 385 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms