RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 JADE3Q92613 823 aa12.26□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MARK4Q96L34 752 aa12.26□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RNF145Q96MT1 663 aa12.26□□□□□ -0.45
TNFRSF1A-202ENST00000366159 WFIKKN1Q96NZ8 548 aa12.26□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ALPK1Q96QP1 1244 aa12.26□□□□□ -0.45
TNFRSF1A-202ENST00000366159 HOXD1Q9GZZ0 328 aa12.26□□□□□ -0.45
TNFRSF1A-202ENST00000366159 A0A0J9YW62 118 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ESPNB1AK53 854 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ETV2O00321 342 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RNASET2O00584 256 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 EIF1AYO14602 144 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SIAH2O43255 324 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DNAJA2O60884 412 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SMNDC1O75940 238 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NTN1O95631 604 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KRT16P08779 473 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MYZAPP0CAP1 466 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FCGR2AP12318 317 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 HPGDP15428 266 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DNASE1P24855 282 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ADH6P28332 368 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 UGT2B10P36537 528 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CPOXP36551 454 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 EIF1AXP47813 144 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SLC1A6P48664 564 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RPL14P50914 215 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ATP12AP54707 1039 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SIRPAP78324 504 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PDCD2Q16342 344 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR4F3Q6IEY1 312 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ESPNLQ6ZVH7 1005 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CLECL1Q8IZS7 167 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CHDHQ8NE62 594 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR5AK3PQ8NH89 298 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 GPR119Q8TDV5 335 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SH3YL1Q96HL8 342 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR7D2Q96RA2 312 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SDF2Q99470 211 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PAQR5Q9NXK6 330 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 STOML1Q9UBI4 398 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NDRG3Q9UGV2 375 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 KCNE5Q9UJ90 142 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 EDARQ9UNE0 448 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FAF1Q9UNN5 650 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DTNAQ9Y4J8 743 aa12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NIPBLQ6KC79 2804 aaeCLIP12.25□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NPIPA5A0A0B4J1W7 369 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 DEFB108AA8MXU0 73 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NPIPA7E9PJI5 369 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SS18L1O75177 396 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OPN1LWP04000 364 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RAF1P04049 648 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NPIPA8P0DM63 369 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SHC1P29353 583 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 EIF1P41567 113 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 P2RX1P51575 399 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF41P51814 821 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SUMO3P55854 103 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SGCBQ16585 318 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PGS1Q32NB8 556 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 C6orf120Q7Z4R8 191 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR5D16Q8NGK9 328 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR2V1Q8NHB1 315 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PPP1R14CQ8TAE6 165 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 MIPOL1Q8TD10 442 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TESCQ96BS2 214 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 GMPPAQ96IJ6 420 aaPredicted RBP12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 NMUR2Q9GZQ4 415 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CARD8Q9Y2G2 431 aa12.24□□□□□ -0.45
TNFRSF1A-202ENST00000366159 C16orf97H3BN30 126 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TNFSF11O14788 317 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CXCL13O43927 109 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FCMRO60667 390 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 GUSBP08236 651 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 POU2F1P14859 743 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CD53P19397 219 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ATP6V1C1P21283 382 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 BGNP21810 368 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CRYGSP22914 178 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ELK4P28324 431 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 RPS26P62854 115 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 FOXF1Q12946 379 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 TOMM34Q15785 309 aaPredicted RBP12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF141Q15928 474 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ARHGAP11BQ3KRB8 267 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SPDYE7PQ495Y7 208 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CEP85LQ5SZL2 805 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 HEPHL1Q6MZM0 1159 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OGFOD2Q6N063 350 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 BHLHB9Q6PI77 547 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 LILRA2Q8N149 483 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 CLEC4FQ8N1N0 589 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ZNF527Q8NB42 609 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 OR6K3Q8NGY3 331 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 PHOSPHO1Q8TCT1 267 aa12.23□□□□□ -0.45
TNFRSF1A-202ENST00000366159 ARSGQ96EG1 525 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms