RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PPP1R14AQ96A00 147 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 NT5DC2Q9H857 520 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 KLHL9Q9P2J3 617 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 NUBP2Q9Y5Y2 271 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 DISC1C4P0D8 188 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 MAGEB4O15481 346 aaPredicted RBP13.02□□□□□ -0.32
COL6A1-201ENST00000361866 HRO43593 1189 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 TCRBP04435 133 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 PRKCAP17252 672 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 ELK1P19419 428 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 SHC2P98077 582 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 ASAH1Q13510 395 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 SSX1Q16384 188 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 ESCO2Q56NI9 601 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 ZNF542PQ5EBM4 170 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 MPP7Q5T2T1 576 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 ATCAYQ86WG3 371 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 ZNF101Q8IZC7 436 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 THAP6Q8TBB0 222 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 TMEM255BQ8WV15 326 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 PDXPQ96GD0 296 aa13.02□□□□□ -0.32
COL6A1-201ENST00000361866 CNN2Q99439 309 aaKnown RBP13.02□□□□□ -0.32
COL6A1-201ENST00000361866 TSNAXQ99598 290 aaKnown RBP13.02□□□□□ -0.32
COL6A1-201ENST00000361866 H3BNC9 293 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 HIST1H1TP22492 207 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-201ENST00000361866 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.33
COL6A1-201ENST00000361866 ARFRP1Q13795 201 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 GPR176Q14439 515 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 PCGF3Q3KNV8 242 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 SLC25A24Q6NUK1 477 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 LCTLQ6UWM7 567 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 CCDC71Q8IV32 467 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-201ENST00000361866 SIAH3Q8IW03 269 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 GPR135Q8IZ08 494 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 NR4A3Q92570 626 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 MOAP1Q96BY2 351 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 GPR174Q9BXC1 333 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 SLAMF7Q9NQ25 335 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 FKBP14Q9NWM8 211 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 AP1M2Q9Y6Q5 423 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 F11P03951 625 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 MSL3P1P0C860 447 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 PGAM2P15259 253 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 SQSTM1Q13501 440 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 C3P1Q6ZMU1 363 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 FCRLAQ7L513 359 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 BCL2L14Q9BZR8 327 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 SPNS1Q9H2V7 528 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-201ENST00000361866 GRHPRQ9UBQ7 328 aa13.02□□□□□ -0.33
COL6A1-201ENST00000361866 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-201ENST00000361866 COL5A3P25940 1745 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-201ENST00000361866 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 CASC3O15234 703 aaKnown RBP13.01□□□□□ -0.33
COL6A1-201ENST00000361866 SLC43A1O75387 559 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 UCHL1P09936 223 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 ART1P52961 327 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 SNRPGP62308 76 aaKnown RBP13.01□□□□□ -0.33
COL6A1-201ENST00000361866 GRK1Q15835 563 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 DEFB110Q30KQ9 67 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 KLHL24Q6TFL4 600 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 APOOLQ6UXV4 268 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 PDZD9Q8IXQ8 264 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 OR5M3Q8NGP4 307 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 OR8D2Q9GZM6 311 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 GSKIPQ9P0R6 139 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 KLHL21Q9UJP4 597 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 A0A1W2PQU0 124 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 YY2O15391 372 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 RNF13O43567 381 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 HBQ1P09105 142 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 SPARCP09486 303 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 CXCR1P25024 350 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 DEFB103AP81534 67 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 DBPQ10586 325 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-201ENST00000361866 AMZ1Q400G9 498 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 KANSL1Q7Z3B3 1105 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 METTL21AQ8WXB1 218 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 NIPAL2Q9H841 368 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 SLC52A3Q9NQ40 469 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 HRASLS2Q9NWW9 162 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 NDUFB11Q9NX14 153 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 EPCAMP16422 314 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 GDI1P31150 447 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 SLC6A11P48066 632 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 EXOSC7Q15024 291 aaKnown RBP13.01□□□□□ -0.33
COL6A1-201ENST00000361866 TRAM1Q15629 374 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 NKPD1Q17RQ9 610 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 BEX5Q5H9J7 111 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 HCAR2Q8TDS4 363 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 BCL7CQ8WUZ0 217 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-201ENST00000361866 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 QPCTLQ9NXS2 382 aa13.01□□□□□ -0.33
COL6A1-201ENST00000361866 A0A1B0GVI7 797 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms