RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CREBL2O60519 120 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 VNN2O95498 520 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 WDPCPO95876 746 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 ARAFP10398 606 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 RBMS1P29558 406 aaKnown RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 SPINT3P49223 89 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 RBMS2Q15434 407 aaKnown RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 C16orf78Q8WTQ4 265 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 YIPF5Q969M3 257 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 LRIG1Q96JA1 1093 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 DMRTA2Q96SC8 542 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 IFT27Q9BW83 186 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 MFFQ9GZY8 342 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 BTBD1Q9H0C5 482 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 CHST8Q9H2A9 424 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 URB1O60287 2271 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 F5P12259 2224 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 CASP8AP2Q9UKL3 1982 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM129A0AVI4 362 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM200CA6NKL6 621 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 AGAP14A8MT82 685 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 LATO43561 262 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 FABP1P07148 127 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 CLTBP09497 229 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 TBXA2RP21731 343 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 FGF9P31371 208 aaPredicted RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 AP1S2P56377 157 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 RAE1P78406 368 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SLC36A2Q495M3 483 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF600Q6ZNG1 722 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ACOT12Q8WYK0 555 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SOSTQ9BQB4 213 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM231Q9H6L2 316 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 CACYBPQ9HB71 228 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 C14orf105Q9NVL8 296 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 MARCH5Q9NX47 278 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SPG21Q9NZD8 308 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 TAC3Q9UHF0 121 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 H7BY64 318 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 RNASET2O00584 256 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SIGLEC6O43699 453 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SUSD5O60279 629 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ACP5P13686 325 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PSMB1P20618 241 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PPP2R1BP30154 601 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 IRS1P35568 1242 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 MAPK9P45984 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 HAAOP46952 286 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 HEPHL1Q6MZM0 1159 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 CHST9Q7L1S5 443 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 C6orf120Q7Z4R8 191 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 OR5J2Q8NH18 312 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 C1orf216Q8TAB5 229 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 MRPS24Q96EL2 167 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 CHFRQ96EP1 664 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PRAP1Q96NZ9 151 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ALG8Q9BVK2 526 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DNTTIP1Q9H147 329 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 FZD3Q9NPG1 666 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 BIN3Q9NQY0 253 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 TESQ9UGI8 421 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 A0A1B0GW55 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 LEFTY1O75610 366 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 RASGRP1O95267 797 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SERPINA3P01011 423 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 GYPBP06028 91 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SMIM11AP58511 58 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 SEC61A1P61619 476 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 E2F1Q01094 437 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 LIPJQ5W064 366 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 IKBIPQ70UQ0 350 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PM20D2Q8IYS1 436 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 L3MBTL4Q8NA19 623 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PCSK9Q8NBP7 692 aaKnown RBP11.86□□□□□ -0.51
VAMP1-201ENST00000361716 OR4D10Q8NGI6 311 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 FATE1Q969F0 183 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 RFKQ969G6 155 aa11.86□□□□□ -0.51
VAMP1-201ENST00000361716 PDCD10Q9BUL8 212 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms