RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
CTR9-201ENST00000361367 GABRG3Q99928 467 aa12.95□□□□□ -0.34
CTR9-201ENST00000361367 WDR90Q96KV7 1748 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 FAM171A2A8MVW0 826 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 TMPRSS11DO60235 418 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 GPX2P18283 190 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 RAB39AQ14964 217 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 IGFN1Q86VF2 1251 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 FBXL6Q8N531 539 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 ABHD11Q8NFV4 315 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 WASH6PQ9NQA3 447 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 BOKQ9UMX3 212 aaPredicted RBP12.94□□□□□ -0.34
CTR9-201ENST00000361367 IGLV3-16A0A075B6K0 115 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 PRAMEF33A0A0G2JMD5 474 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 DNAJB5O75953 348 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 CLPXO76031 633 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 CD46P15529 392 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 GGT2P36268 569 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 RRADP55042 308 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 HSD17B12Q53GQ0 312 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 SLC18B1Q6NT16 456 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 MED25Q71SY5 747 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 UTS2BQ765I0 119 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 CEACAM19Q7Z692 300 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 TCEAL2Q9H3H9 227 aaPredicted RBP12.94□□□□□ -0.34
CTR9-201ENST00000361367 MCTS1Q9ULC4 181 aaKnown RBP12.94□□□□□ -0.34
CTR9-201ENST00000361367 PPT2Q9UMR5 302 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 A0A1W2PPK0 400 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 CLCA1A8K7I4 914 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 PCDH17O14917 1159 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 SBK3P0C264 359 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 SLC2A2P11168 524 aaPredicted RBP12.94□□□□□ -0.34
CTR9-201ENST00000361367 POU3F2P20265 443 aaPredicted RBP12.94□□□□□ -0.34
CTR9-201ENST00000361367 SSR4P51571 173 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 ZNF791Q3KP31 576 aaPredicted RBP12.94□□□□□ -0.34
CTR9-201ENST00000361367 C15orf40Q8WUR7 153 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 NUDT8Q8WV74 236 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 EID2BQ96D98 161 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 TMEM41AQ96HV5 264 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 ANKRD60Q9BZ19 345 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 OR52D1Q9H346 318 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 LRRN3Q9H3W5 708 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 ZDBF2Q9HCK1 2354 aa12.94□□□□□ -0.34
CTR9-201ENST00000361367 SERINC4A6NH21 518 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 J3KTA2 159 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 APOC1P02654 83 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 NME1P15531 152 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 UBE2NP61088 152 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 FOXK1P85037 733 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 HLA-BQ31612 363 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 YOD1Q5VVQ6 348 aaPredicted RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 RAB11FIP2Q7L804 512 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 ZFP41Q8N8Y5 198 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 SYT14Q8NB59 555 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 DDX31Q9H8H2 851 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 NSA2O95478 260 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 CRABP1P29762 137 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 ERVK-25P63136 954 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 TRAM1Q15629 374 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 FRMPD2BQ6IN97 320 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 XKR5Q6UX68 686 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 ZNF420Q8TAQ5 688 aaPredicted RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 ZMYND19Q96E35 227 aaPredicted RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 FER1L6-AS2Q96M78 137 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 DHDHQ9UQ10 334 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 A6NIZ1 184 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 DAP3P51398 398 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 BCAP31P51572 246 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 PRKXP51817 358 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 GABARAPL2P60520 117 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 GMFBP60983 142 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 RAP1BP61224 184 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 RAP1AP62834 184 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 RIN1Q13671 783 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 SMCO1Q147U7 214 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 ELAVL1Q15717 326 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 ASB18Q6ZVZ8 466 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 SNX29P2Q8IUI4 249 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 UTP23Q9BRU9 249 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 EDEM2Q9BV94 578 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 TMEM9BQ9NQ34 198 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 INIPQ9NRY2 104 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 SNX11Q9Y5W9 270 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 SLC22A7Q9Y694 548 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 PHYHO14832 338 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 PIAS2O75928 621 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 IDUAP35475 653 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 HNRNPA0Q13151 305 aaKnown RBP12.93□□□□□ -0.34
CTR9-201ENST00000361367 SDR9C7Q8NEX9 313 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 ZNF696Q9H7X3 374 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 TNFRSF12AQ9NP84 129 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
CTR9-201ENST00000361367 TRAV27A0A087WT01 109 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 C12orf71A8MTZ7 269 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 K7EQS6 105 aa12.92□□□□□ -0.34
CTR9-201ENST00000361367 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms