RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 C5orf34Q96MH7 638 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 RNF145Q96MT1 663 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 RAB3IPQ96QF0 476 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 HES7Q9BYE0 225 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 HHATLQ9HCP6 504 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 ADPRHL2Q9NX46 363 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 RPS6KA6Q9UK32 745 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 WIF1Q9Y5W5 379 aa11.33□□□□□ -0.6
NIF3L1-201ENST00000359683 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 CFAP73A6NFT4 308 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 SYT5O00445 386 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 PEX1O43933 1283 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 EIF4E2O60573 245 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 BCAS1O75363 584 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 CSTAP01040 98 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 FESP07332 822 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 RNF144AP50876 292 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 FOXO1Q12778 655 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 GLIPR1L2Q4G1C9 344 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 MTX3Q5HYI7 312 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 MRPL2Q5T653 305 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 CYP2R1Q6VVX0 501 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 COMTD1Q86VU5 262 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 GATSQ8NAP1 163 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 TMEM178AQ8NBL3 297 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 CNOT9Q92600 299 aaKnown RBP11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 SLC35B4Q969S0 331 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 FAM173AQ9BQD7 235 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 DOHHQ9BU89 302 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 ARMC7Q9H6L4 198 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 KLHL1Q9NR64 748 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 RLIMQ9NVW2 624 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
NIF3L1-201ENST00000359683 A0A0G2JMM0 328 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 A0A1W2PPB8 328 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 A0A1W2PRS3 328 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 TCRBV5S2A0A599 114 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 AQP12BA6NM10 295 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 C17orf51A8MQB3 221 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 KIR3DP1A8MWS1 328 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 G3V3Y1 287 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 J3QKU1 62 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 GTPBP1O00178 669 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 SNPHO15079 494 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF264O43296 627 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 SUV39H1O43463 412 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 OIP5O43482 229 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 STAMBPO95630 424 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 UBL4AP11441 157 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 DNASE1L1P49184 302 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 FLOT2Q14254 428 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 INPP5JQ15735 1006 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 EIPR1Q53HC9 387 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 TIGD3Q6B0B8 471 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 AQP12AQ8IXF9 295 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 OR2M7Q8NG81 312 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 LZICQ8WZA0 190 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 POP5Q969H6 163 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 TRIM15Q9C019 465 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 EVA1AQ9H8M9 152 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 DNAJB12Q9NXW2 375 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 TUBA8Q9NY65 449 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 SAMD4AQ9UPU9 718 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 CARD8Q9Y2G2 431 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 PINLYPA6NC86 204 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 B4DXG7 233 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 CIB2O75838 187 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 PRKD3O94806 890 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF682O95780 498 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 SFTPCP11686 197 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 MSX1P28360 303 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 GPR85P60893 370 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF117Q03924 483 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 SKP2Q13309 424 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 ZNF169Q14929 603 aaPredicted RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 NDUFAF6Q330K2 333 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 C1orf146Q5VVC0 180 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 RPUSD3Q6P087 351 aaKnown RBP11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 CBLN3Q6UW01 205 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 PLCZ1Q86YW0 608 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 FADS6Q8N9I5 356 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 TOR1AIP2Q8NFQ8 470 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 OR10Q1Q8NGQ4 319 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 B4GALNT2Q8NHY0 566 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 PYURFQ96I23 114 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 TPD52L3Q96J77 140 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 LRGUKQ96M69 825 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 ARHGDIGQ99819 225 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 WFDC6Q9BQY6 131 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 KLHL28Q9NXS3 571 aa11.31□□□□□ -0.6
NIF3L1-201ENST00000359683 PPP4R1LQ9P1A2 415 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms