RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 PRPS1P60891 318 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 ACVR1Q04771 509 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 ELOAQ14241 798 aaKnown RBP12.87□□□□□ -0.35
VCP-201ENST00000358901 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 GABRPO00591 440 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 SEMA4FO95754 770 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 PET100P0DJ07 73 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 S100A2P29034 98 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 P2RY2P41231 377 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 TRA2BP62995 288 aaKnown RBP12.87□□□□□ -0.35
VCP-201ENST00000358901 KDM4DQ6B0I6 523 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 CFAP77Q6ZQR2 320 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 CELF2-AS1Q8N7Q2 184 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 FAM46BQ96A09 425 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 NUBP2Q9Y5Y2 271 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 OR7A10O76100 309 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 F11P03951 625 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 ALDOBP05062 364 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 CST5P28325 142 aaPredicted RBP12.87□□□□□ -0.35
VCP-201ENST00000358901 ILKQ13418 452 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 RAB30Q15771 203 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 MEPCEQ7L2J0 689 aaKnown RBP12.87□□□□□ -0.35
VCP-201ENST00000358901 OLIG3Q7RTU3 272 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 COMMD7Q86VX2 200 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 KLHL15Q96M94 604 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 TJP1Q07157 1748 aa12.87□□□□□ -0.35
VCP-201ENST00000358901 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 SC5DO75845 299 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 AIFM1O95831 613 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 B3GALT4O96024 378 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 NR0B1P51843 470 aaKnown RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 PFN3P60673 137 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 SLC35A2P78381 396 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 SQSTM1Q13501 440 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 LRRC28Q86X40 367 aaPredicted RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 TMEM151BQ8IW70 566 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 LRRC56Q8IYG6 542 aaPredicted RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 PRR22Q8IZ63 422 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 MRPL43Q8N983 215 aaKnown RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 P2RY12Q9H244 342 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 PPT2Q9UMR5 302 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 MICAL3Q7RTP6 2002 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 TP53I11O14683 189 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 RAB3DO95716 219 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 SLC1A3P43003 542 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 KIR2DS3Q14952 304 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 TSC22D1Q15714 1073 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 TPSD1Q9BZJ3 242 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 PITHD1Q9GZP4 211 aaPredicted RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 SLC5A7Q9GZV3 580 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 MED20Q9H944 212 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 B3GAT2Q9NPZ5 323 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 DKKL1Q9UK85 242 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 C17orf113A0A1B0GUU1 675 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 MEIS3P1A6NDR6 274 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 TARM1B6A8C7 271 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 SPDEFO95238 335 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 ZNF16P17020 682 aaPredicted RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 CD34P28906 385 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 KCNJ10P78508 379 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 FGL1Q08830 312 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 LRRC26Q2I0M4 334 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 INAVAQ3KP66 663 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 PLEKHN1Q494U1 663 aaPredicted RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 OR4C15Q8NGM1 316 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 FGF13Q92913 245 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 TXNL4BQ9NX01 149 aaKnown RBP12.86□□□□□ -0.35
VCP-201ENST00000358901 ENTPD2Q9Y5L3 495 aa12.86□□□□□ -0.35
VCP-201ENST00000358901 MEGF11A6BM72 1044 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NPIPA2E9PIF3 369 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NPIPA3F8WFD2 350 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 ACOT7O00154 380 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PHYHO14832 338 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 FARS2O95363 451 aaKnown RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 MT-ND4P03905 459 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PROS1P07225 676 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 CA3P07451 260 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 CASRP41180 1078 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 POU3F4P49335 361 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 HSF5Q4G112 596 aaPredicted RBP12.85□□□□□ -0.35
VCP-201ENST00000358901 HOXD1Q9GZZ0 328 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 IKZF5Q9H5V7 419 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 NT5DC2Q9H857 520 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 PCDHB16Q9NRJ7 776 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 RP1P56715 2156 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 A0A1B0GTL3 188 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 WASHC1A8K0Z3 465 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 SDC3O75056 442 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 SCG5P05408 212 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 HSD11B2P80365 405 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 IRF4Q15306 451 aa12.85□□□□□ -0.35
VCP-201ENST00000358901 DUSP7Q16829 419 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms