RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 C19orf53Q9UNZ5 99 aaPredicted RBP13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 CMAHPQ9Y471 501 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 WDR45Q9Y484 360 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 PCDHGB2Q9Y5G2 931 aa13.27□□□□□ -0.28
NIPAL3-203ENST00000358028 DYRK3O43781 588 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 OR5F1O95221 314 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 NTN1O95631 604 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 GAAP10253 952 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 FPR3P25089 353 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 OMPP47874 163 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 MTNR1AP48039 350 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 HOXC5Q00444 222 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ID2Q02363 134 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 LIPKQ5VXJ0 399 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 HSDL2Q6YN16 418 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 RRM2BQ7LG56 351 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 PRSS41Q7RTY9 318 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 GDF7Q7Z4P5 450 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ZNF655Q8N720 491 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 SCAIQ8N9R8 606 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ASB15Q8WXK1 588 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 RNFT2Q96EX2 444 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 SLC41A3Q96GZ6 507 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ELF4Q99607 663 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 PIGUQ9H490 435 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 SNTG1Q9NSN8 517 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 SACM1LQ9NTJ5 587 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 TXNL4BQ9NX01 149 aaKnown RBP13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 CNIH4Q9P003 139 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ZNF232Q9UNY5 417 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 NTNG1Q9Y2I2 539 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 V9GYH0 126 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 SPACA6W5XKT8 324 aa13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 ARID1BQ8NFD5 2236 aaPredicted RBP13.27□□□□□ -0.29
NIPAL3-203ENST00000358028 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 OR5K4A6NMS3 321 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 CELA2BP08218 269 aaPredicted RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 CASP3P42574 277 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 SLC9A3P48764 834 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 EIF2B5Q13144 721 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 SHBQ15464 509 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 TRMT12Q53H54 448 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 EXOSC6Q5RKV6 272 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 NKAIN4Q8IVV8 208 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 SFTPA2Q8IWL1 248 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 SLC37A2Q8TED4 501 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 AP3S1Q92572 193 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 KIAA1143Q96AT1 154 aaPredicted RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 KCTD7Q96MP8 289 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 SDF2Q99470 211 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 COQ7Q99807 217 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 SYNDIG1Q9H7V2 258 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 MOV10Q9HCE1 1003 aaKnown RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 KRCC1Q9NPI7 259 aaPredicted RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 HRASLS2Q9NWW9 162 aa13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 CAB39Q9Y376 341 aaPredicted RBP13.26□□□□□ -0.29
NIPAL3-203ENST00000358028 A0A087WV62 115 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 A0A1B0GTQ1 180 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 RGS5O15539 181 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 FGF17O60258 216 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 LDB3O75112 727 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 THY1P04216 161 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 ATP1B1P05026 303 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 THBS1P07996 1170 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 NT5EP21589 574 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 FGF9P31371 208 aaPredicted RBP13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 EEF1A1P68104 462 aaKnown RBP13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 SHC2P98077 582 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 MAP4K2Q12851 820 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 DUSP8Q13202 625 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 FZD2Q14332 565 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 EIPR1Q53HC9 387 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 ZNF542PQ5EBM4 170 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 MANEAQ5SRI9 462 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 PAQR6Q6TCH4 344 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 QSOX2Q6ZRP7 698 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 OR8H2Q8N162 312 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 CA13Q8N1Q1 262 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 CSNK1A1LQ8N752 337 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 TMEM52Q8NDY8 209 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 ANKK1Q8NFD2 765 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 IL17RDQ8NFM7 739 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 FAM174AQ8TBP5 190 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 UFD1Q92890 307 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 TRMT61AQ96FX7 289 aaKnown RBP13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 ZNF350Q9GZX5 532 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 ERVMER34-1Q9H9K5 563 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 ADAP2Q9NPF8 381 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 GSTK1Q9Y2Q3 226 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 TPRP12270 2363 aaKnown RBP13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 GOLGA4Q13439 2230 aaKnown RBP13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 SPTY2D1-AS1A0A0U1RR47 76 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 CYR61O00622 381 aa13.25□□□□□ -0.29
NIPAL3-203ENST00000358028 GALR3O60755 368 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms