RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 POU4F3Q15319 338 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 NXPE4Q6UWF7 544 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM207Q6UWW9 146 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF813Q6ZN06 617 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 RPS27LQ71UM5 84 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MEX3DQ86XN8 651 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF781Q8N8C0 355 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 GLIS3Q8NEA6 775 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 UBTD2Q8WUN7 234 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 KCNE4Q8WWG9 221 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 GGHQ92820 318 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ITPKCQ96DU7 683 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MS4A12Q9NXJ0 267 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 DNAJB4Q9UDY4 337 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SLCO3A1Q9UIG8 710 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 A0A0D9SEW6 157 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF207O43670 478 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 AK1P00568 194 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CST3P01034 146 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 HNRNPA2B1P22626 353 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SSTR4P31391 388 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 RFC3P40938 356 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MRPS34P82930 218 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 DUSP2Q05923 314 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SPEM2Q0P670 501 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 TRAM2Q15035 370 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 NPY5RQ15761 445 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CTSL3PQ5NE16 218 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 OR4C11Q6IEV9 310 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SVOPLQ8N434 492 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ADAMTS19Q8TE59 1207 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ST8SIA4Q92187 359 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SLC41A3Q96GZ6 507 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 TSNAXQ99598 290 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 RTP3Q9BQQ7 232 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CLSTN3Q9BQT9 956 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 UNKLQ9H9P5 680 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CXorf21Q9HAI6 301 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CDH22Q9UJ99 828 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 KLHL21Q9UJP4 597 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SLC7A7Q9UM01 511 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CDH10Q9Y6N8 788 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 XPNPEP2O43895 674 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 PRAMEF2O60811 474 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CALCBP10092 127 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 GAAP10253 952 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 PRPS1L1P21108 318 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 DAP3P51398 398 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 Q56UQ5 140 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ARL13AQ5H913 290 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 NXNL2Q5VZ03 156 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 FBXL22Q6P050 247 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ANKRD16Q6P6B7 361 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 LHFPL3Q86UP9 236 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 OR5K1Q8NHB7 308 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MOB3AQ96BX8 217 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 C7orf26Q96N11 449 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SMOQ99835 787 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 PKP2Q99959 881 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 BTBD2Q9BX70 525 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SGPP1Q9BX95 441 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 LINC00597Q9H2U6 94 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 LOC102724200A0A096LPH7 203 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 FAM181BA6NEQ2 426 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 DRGXA6NNA5 263 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 KLF11O14901 512 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CLDN1O95832 211 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF30P17039 623 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 L1CAMP32004 1257 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 GALEQ14376 348 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 PTCHD3Q3KNS1 767 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 KDM4DQ6B0I6 523 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SFRP4Q6FHJ7 346 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SGPP2Q8IWX5 399 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SKA3Q8IX90 412 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 NANPQ8TBE9 248 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ALG3Q92685 438 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 TEPSINQ96N21 525 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CNN2Q99439 309 aaKnown RBP5.47□□□□□ -1.53
BRCA1-203ENST00000357654 RIOX1Q9H6W3 641 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 SLC35D1Q9NTN3 355 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 EXTL2Q9UBQ6 330 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 NME7Q9Y5B8 376 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 NFS1Q9Y697 457 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 USP54Q70EL1 1684 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 PIAS2O75928 621 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 FECHP22830 423 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 PEX2P28328 305 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 MAGEB1P43366 347 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CARD18P57730 90 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 GPX6P59796 221 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 RAB11AP62491 216 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 ACTG1P63261 375 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 DPY19L1Q2PZI1 675 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 OR2B11Q5JQS5 317 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 TCTE1Q5JU00 501 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 CCNJQ5T5M9 372 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 LIPJQ5W064 366 aa5.47□□□□□ -1.53
BRCA1-203ENST00000357654 B3GLCTQ6Y288 498 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms