RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 CFAP97Q9P2B7 532 aa11.27□□□□□ -0.6
SMARCAL1-201ENST00000357276 GPR55Q9Y2T6 319 aaPredicted RBP11.27□□□□□ -0.6
SMARCAL1-201ENST00000357276 PCDHGA9Q9Y5G4 932 aaKnown RBP11.27□□□□□ -0.6
SMARCAL1-201ENST00000357276 HMSDA8MTL9 139 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 WASH3PC4AMC7 463 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 L7N2F9 121 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 RTCAO00442 366 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 LILRB5O75023 590 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ABLIM3O94929 683 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ALPPL2P10696 532 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 IFNGR1P15260 489 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 RPL17P18621 184 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 RAB3BP20337 219 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 OR1D2P34982 312 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 POLR2LP62875 67 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ST3GAL3Q11203 375 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ZNF169Q14929 603 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 MAPK14Q16539 360 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 C6orf132Q5T0Z8 1188 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 SFRP5Q5T4F7 317 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 PIP5KL1Q5T9C9 394 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 MEPCEQ7L2J0 689 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 C17orf47Q8NEP4 570 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 OR2T33Q8NG76 320 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 KAT2AQ92830 837 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 GLYATL1Q969I3 302 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ZNF689Q96CS4 500 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ZFP3Q96NJ6 502 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 DPH7Q9BTV6 452 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 GLIPR2Q9H4G4 154 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ELAC1Q9H777 363 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 AUNIPQ9H7T9 357 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 SPATA2Q9UM82 520 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 BAIAP2Q9UQB8 552 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 PRELID3BQ9Y3B1 194 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 MPTX1A8MV57 137 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 LGALS8O00214 317 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 LDOC1O95751 146 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 PROS1P07225 676 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 GALTP07902 379 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 ZGLP1P0C6A0 271 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 BUD31P41223 144 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 VEGFCP49767 419 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 KHKP50053 298 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 GATMP50440 423 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 TMEM115Q12893 351 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 LCTLQ6UWM7 567 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 OR6V1Q8N148 313 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 CHST14Q8NCH0 376 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 AMDHD1Q96NU7 426 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 GSDMCQ9BYG8 508 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 BEX1Q9HBH7 125 aa11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 EXOSC3Q9NQT5 275 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-201ENST00000357276 NAP1L6A6NFF2 107 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TMPRSS11DO60235 418 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 SNRPBP14678 240 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 GABRA1P14867 456 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 ZC3H14Q6PJT7 736 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 ARL9Q6T311 187 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 ATRAIDQ6UW56 229 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TMEM64Q6YI46 380 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 MBOAT2Q6ZWT7 520 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 HMGN2P46Q86SG4 172 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 NKAIN4Q8IVV8 208 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 KCT2Q8NC54 265 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 BRIX1Q8TDN6 353 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 EXOSC8Q96B26 276 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 NPAS1Q99742 590 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 UBQLN3Q9H347 655 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 MCCC2Q9HCC0 563 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TCRBV16S1A1N1A0A5B0 115 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 CDC42EP2O14613 210 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 PDCD5O14737 125 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 PGRMC2O15173 223 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 MT-ND5P03915 603 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 H2AFB1P0C5Y9 115 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 ATP6V1E1P36543 226 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 FXYD6P3P58550 94 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TAS2R43P59537 309 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 HTR4Q13639 388 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 RNASE12Q5GAN4 147 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 CLVS2Q5SYC1 327 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TMEM220Q6QAJ8 160 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 GDPD4Q6W3E5 623 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 PRSS45Q7RTY3 260 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 CLRN3Q8NCR9 226 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 ATOH1Q92858 354 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 MRPS24Q96EL2 167 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 ART5Q96L15 291 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 IFT27Q9BW83 186 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 STARD7Q9NQZ5 370 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 PCDHB16Q9NRJ7 776 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TEX10Q9NXF1 929 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 TSPAN11A1L157 253 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 FAM183AA6NL82 134 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 NDUFV2P19404 249 aa11.26□□□□□ -0.61
SMARCAL1-201ENST00000357276 S100A11P31949 105 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms