RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 NSDHLQ15738 373 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 TMEM25Q86YD3 366 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 TMEM130Q8N3G9 435 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 RPL3LQ92901 407 aaKnown RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 KCTD12Q96CX2 325 aaKnown RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 INTS14Q96SY0 518 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 SLC17A9Q9BYT1 436 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 KLK4Q9Y5K2 254 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 FTCDNL1E5RQL4 147 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 PSMB10P40306 273 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 GIPRP48546 466 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 LILRA2Q8N149 483 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 OR56B4Q8NH76 319 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 TSACCQ96A04 125 aaPredicted RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 GIMAP5Q96F15 307 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 PLEKHA3Q9HB20 300 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 SLAMF8Q9P0V8 285 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 APOBEC3BQ9UH17 382 aaKnown RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 KDM4FA0A1W2PPD8 638 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 SLC34A2O95436 690 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 IQCF3P0C7M6 154 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 FXYD4P59646 89 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 RPS27AP62979 156 aaKnown RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 UBA52P62987 128 aaKnown RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 CXADRP78310 365 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 TLE3Q04726 772 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 PEA15Q15121 130 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 IL17RCQ8NAC3 791 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 TSPAN10Q9H1Z9 355 aaPredicted RBP13.96□□□□□ -0.17
CHD4-201ENST00000357008 EVA1AQ9H8M9 152 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 ATG4BQ9Y4P1 393 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 P2RX6O15547 441 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 CACNG3O60359 315 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 THEGLP0DJG4 465 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 SELPLGQ14242 412 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 PDZD3Q86UT5 571 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 ACVR1CQ8NER5 493 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 OLAHQ9NV23 265 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 MYH15Q9Y2K3 1946 aa13.96□□□□□ -0.17
CHD4-201ENST00000357008 HEPACAM2A8MVW5 462 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 RAC2P15153 192 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 AHRP35869 848 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 TAS2R19P59542 299 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 RAB4BP61018 213 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 ARHGAP19Q14CB8 494 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 RAB30Q15771 203 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 TMEM244Q5VVB8 128 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 RETREG3Q86VR2 466 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 SPTSSAQ969W0 71 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 FOXRED1Q96CU9 486 aaPredicted RBP13.96□□□□□ -0.18
CHD4-201ENST00000357008 KLHL13Q9P2N7 655 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 GABRPO00591 440 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 RAB33AQ14088 237 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 P2RY14Q15391 338 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 ACOT4Q8N9L9 421 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 OR14A2Q96R54 314 aa13.96□□□□□ -0.18
CHD4-201ENST00000357008 CPPED1Q9BRF8 314 aaPredicted RBP13.96□□□□□ -0.18
CHD4-201ENST00000357008 A6NIN4 97 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 MEIS3P2A8K0S8 358 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 OR2T1O43869 369 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ZNF100Q8IYN0 542 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 RCBTB1Q8NDN9 531 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 EGLN2Q96KS0 407 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 OR6C6A6NF89 314 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 NUDT7P0C024 238 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 RPS2P15880 293 aaKnown RBP13.95□□□□□ -0.18
CHD4-201ENST00000357008 DAP3P51398 398 aaKnown RBP13.95□□□□□ -0.18
CHD4-201ENST00000357008 TANKQ92844 425 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ST6GALNAC5Q9BVH7 336 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 CIB4A0PJX0 185 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 RAD1O60671 282 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 TGM6O95932 706 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 GABRA5P31644 462 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 PSPHP78330 225 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 CLEC14AQ86T13 490 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 OR5H6Q8NGV6 325 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 RNF128Q8TEB7 428 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ALOXE3Q9BYJ1 711 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 PLEKHJ1Q9NW61 149 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ARHGAP33O14559 1287 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 CHATP28329 748 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 EEF1A1P5Q5VTE0 462 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 FAM69BQ5VUD6 431 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ZNF546Q86UE3 836 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 MEX3DQ86XN8 651 aaKnown RBP13.95□□□□□ -0.18
CHD4-201ENST00000357008 DIO2Q92813 273 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 FAM71F1Q96KD3 344 aaPredicted RBP13.95□□□□□ -0.18
CHD4-201ENST00000357008 HEMK1Q9Y5R4 338 aaPredicted RBP13.95□□□□□ -0.18
CHD4-201ENST00000357008 ZNF26P17031 533 aaPredicted RBP13.95□□□□□ -0.18
CHD4-201ENST00000357008 SVBPQ8N300 66 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 PAQR8Q8TEZ7 354 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 MYADMQ96S97 322 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 RCE1Q9Y256 329 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ENTPD2Q9Y5L3 495 aa13.95□□□□□ -0.18
CHD4-201ENST00000357008 ZNF888P0CJ79 500 aaPredicted RBP13.94□□□□□ -0.18
CHD4-201ENST00000357008 CCR7P32248 378 aa13.94□□□□□ -0.18
CHD4-201ENST00000357008 HHEXQ03014 270 aa13.94□□□□□ -0.18
CHD4-201ENST00000357008 DCST2Q5T1A1 773 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms