RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 GATSQ8NAP1 163 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 SLC38A5Q8WUX1 472 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 RBM18Q96H35 190 aaKnown RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 SIRT5Q9NXA8 310 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 EIF1AYO14602 144 aaKnown RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 CPNE6O95741 557 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 RPS25P62851 125 aaKnown RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 OPCMLQ14982 345 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 NDUFA9Q16795 377 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 DPPA4Q7L190 304 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 SPRYD4Q8WW59 207 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 GIMAP1Q8WWP7 306 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 CSF3RQ99062 836 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 RGCCQ9H4X1 137 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 AKIP1Q9NQ31 210 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 STARD5Q9NSY2 213 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 MUTYHQ9UIF7 546 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 PSORS1C1Q9UIG5 152 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 TMEM5Q9Y2B1 443 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 GFYI3L273 518 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 APOC1P02654 83 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 MC3RP41968 323 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 RUNX3Q13761 415 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 Q6ZNB5 142 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 OSTF1Q92882 214 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 LMF1Q96S06 567 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PCBD2Q9H0N5 130 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PLXNB2O15031 1838 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 POLR1CO15160 346 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 KCNK2O95069 426 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 SPARCP09486 303 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 GNSP15586 552 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 MMP12P39900 470 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 RPS5P46782 204 aaKnown RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 CLDN12P56749 244 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 FAM83HQ6ZRV2 1179 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 DGLUCYQ7Z3D6 616 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 FRMD1Q8N878 549 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 OR8J2Q8NGG1 315 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 HIF3AQ9Y2N7 669 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 OR2A25A4D2G3 310 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 H0YIV9 168 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 LGALS8O00214 317 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PRSS23O95084 383 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 RCBTB2O95199 551 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 ITGAMP11215 1152 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PVRP15151 417 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 AKR1C4P17516 323 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PCGF2P35227 344 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 TPMTP51580 245 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 DYRK1AQ13627 763 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PAQR6Q6TCH4 344 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 SLC9B2Q86UD5 537 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PTOV1Q86YD1 416 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 OR9A2Q8NGT5 310 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 RBPMSQ93062 196 aaKnown RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 DUS3LQ96G46 650 aaKnown RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 CALML5Q9NZT1 146 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 TVP23AA6NH52 213 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 GIMD1P0DJR0 217 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 AHRP35869 848 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 SLC6A12P48065 614 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 CHAF1BQ13112 559 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 BAK1Q16611 211 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 PRRT3Q5FWE3 981 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 TOR2AQ5JU69 321 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 HENMT1Q5T8I9 393 aaKnown RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 LYPD4Q6UWN0 246 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 NRMQ8IXM6 262 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 NSMAFQ92636 917 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 LRIG1Q96JA1 1093 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 GAL3ST4Q96RP7 486 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 MICU1Q9BPX6 476 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 ACTR6Q9GZN1 396 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 SRA1Q9HD15 236 aaKnown RBP13.19□□□□□ -0.3
SREBF1-202ENST00000355815 RPS10P5Q9NQ39 176 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 NLGN3Q9NZ94 848 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 SCP2D1Q9UJQ7 156 aa13.19□□□□□ -0.3
SREBF1-202ENST00000355815 TRBV5-4A0A0C4DH59 114 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 A0A1B0GVI7 797 aa13.18□□□□□ -0.3
SREBF1-202ENST00000355815 YY2O15391 372 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms