RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 IL20RBQ6UXL0 311 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 ZNF695Q8IW36 515 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 ASCC1Q8N9N2 400 aaKnown RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 GPR148Q8TDV2 347 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 C3orf30Q96M34 536 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 FAIMQ9NVQ4 179 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 B3GNT2Q9NY97 397 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 KLHL13Q9P2N7 655 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 ZNF443Q9Y2A4 671 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 MEGF11A6BM72 1044 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 CD53P19397 219 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 CDK2P24941 298 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 ETV5P41161 510 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 TM4SF4P48230 202 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 RAB41Q5JT25 222 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 PRRC1Q96M27 445 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 MYADMQ96S97 322 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 NUDT22Q9BRQ3 303 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 TIMM29Q9BSF4 260 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 DDX31Q9H8H2 851 aaKnown RBP12.41□□□□□ -0.42
SCN8A-202ENST00000355133 LHX3Q9UBR4 397 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 PCDHGA8Q9Y5G5 932 aa12.41□□□□□ -0.42
SCN8A-202ENST00000355133 H7C2Y5 167 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 F3P13726 295 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 POLR2HP52434 150 aaKnown RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ADARB1P78563 741 aaKnown RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SF3B4Q15427 424 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 DCP2Q8IU60 420 aaKnown RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CHFRQ96EP1 664 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 USB1Q9BQ65 265 aaKnown RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SAP130Q9H0E3 1048 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ENKD1Q9H0I2 346 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CSNK1G1Q9HCP0 422 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SACM1LQ9NTJ5 587 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CUTCQ9NTM9 273 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 NUMBLQ9Y6R0 609 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 BCAT2O15382 392 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CPMP14384 443 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 AGTR1P30556 359 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 AQP2P41181 271 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CSNK1DP48730 415 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 NOVP48745 357 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SERPINA11Q86U17 422 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ANKRD13BQ86YJ7 626 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SERPINA12Q8IW75 414 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CCDC71LQ8N9Z2 235 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ITFG2Q969R8 447 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 TXLNGYQ9BZA5 131 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 OR10A5Q9H207 317 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 OR10A2Q9H208 303 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 PPIL3Q9H2H8 161 aaKnown RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 MAGED1Q9Y5V3 778 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SLC16A7O60669 478 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ERVFC1P60507 584 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 PTPRRQ15256 657 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 PROX2Q3B8N5 592 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ARRDC2Q8TBH0 407 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CPT1CQ8TCG5 803 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 HLA-CQ95604 372 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CCDC32Q9BV29 185 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ULBP3Q9BZM4 244 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 PITHD1Q9GZP4 211 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CHRM4P08173 479 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 ZNF14P17017 642 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 HOXC13P31276 330 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 CXCR4P61073 352 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 NFATC3Q12968 1075 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 SENP5Q96HI0 755 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-202ENST00000355133 EGLN2Q96KS0 407 aa12.4□□□□□ -0.42
SCN8A-202ENST00000355133 NUDT1P36639 197 aa12.4□□□□□ -0.43
SCN8A-202ENST00000355133 CAV2P51636 162 aa12.4□□□□□ -0.43
SCN8A-202ENST00000355133 B3GNT7Q8NFL0 401 aa12.4□□□□□ -0.43
SCN8A-202ENST00000355133 TRUB1Q8WWH5 349 aaKnown RBP12.4□□□□□ -0.43
SCN8A-202ENST00000355133 ASB11Q8WXH4 323 aa12.4□□□□□ -0.43
SCN8A-202ENST00000355133 OR5B12Q96R08 314 aa12.4□□□□□ -0.43
SCN8A-202ENST00000355133 USP3Q9Y6I4 520 aa12.4□□□□□ -0.43
SCN8A-202ENST00000355133 CSNK1EP49674 416 aaKnown RBP12.39□□□□□ -0.43
SCN8A-202ENST00000355133 SYPL1Q16563 259 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 ABHD12BQ7Z5M8 362 aaPredicted RBP12.39□□□□□ -0.43
SCN8A-202ENST00000355133 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCN8A-202ENST00000355133 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 BTBD2Q9BX70 525 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 GPN2Q9H9Y4 310 aaPredicted RBP12.39□□□□□ -0.43
SCN8A-202ENST00000355133 CCL26Q9Y258 94 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 RFXAPO00287 272 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 ZFAND5O76080 213 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 MMP2P08253 660 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 ERVK-16P61578 105 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 SNRPD2P62316 118 aaKnown RBP12.39□□□□□ -0.43
SCN8A-202ENST00000355133 MBTPS1Q14703 1052 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 OR1Q1Q15612 314 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 NUP188Q5SRE5 1749 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 PLCXD3Q63HM9 321 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 PODNL1Q6PEZ8 512 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 CMTM1Q8IZ96 169 aa12.39□□□□□ -0.43
SCN8A-202ENST00000355133 RSC1A1Q92681 617 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms