RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TFGQ92734 400 aaPredicted RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 KLK6Q92876 244 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 RELTQ969Z4 430 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 TMEM106CQ9BVX2 250 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 SGPP1Q9BX95 441 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ZDHHC5Q9C0B5 715 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 POLR2J3Q9H1A7 115 aaKnown RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 XKR8Q9H6D3 395 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 THSD1Q9NS62 852 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 COA4Q9NYJ1 87 aa8.77□□□□□ -1.01
SMG6-202ENST00000354901 ZFR2Q9UPR6 939 aaKnown RBP8.77□□□□□ -1.01
SMG6-202ENST00000354901 SCN2AQ99250 2005 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 CXorf51AA0A1B0GTR3 108 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 SIGLEC6O43699 453 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 WDPCPO95876 746 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 PCCBP05166 539 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 CEBPBP17676 345 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 OPRD1P41143 372 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 S100A12P80511 92 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 EIF4HQ15056 248 aaKnown RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 CRB2Q5IJ48 1285 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 SLC25A25Q6KCM7 469 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 LAS2Q8IYD9 372 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 C12orf45Q8N5I9 185 aaPredicted RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 FAM46DQ8NEK8 389 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 OR4D11Q8NGI4 311 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 PAWRQ96IZ0 340 aaKnown RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 ZCCHC2Q9C0B9 1178 aaKnown RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 OR10A4Q9H209 315 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 TMEM38AQ9H6F2 299 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 MVB12BQ9H7P6 319 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 A0A0C4DFX4 3053 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 FOXE1O00358 373 aaPredicted RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 SPINT1O43278 529 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 OR1F1O43749 312 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 HPXP02790 462 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 C8orf89P0DMQ9 161 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 SPP1P10451 314 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 ELK1P19419 428 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 CELP19835 753 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 UQCRC2P22695 453 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 PTX3P26022 381 aaPredicted RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 ATP6V1E1P36543 226 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 XKP51811 444 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 PDE7AQ13946 482 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 CLINT1Q14677 625 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 TCTN3Q6NUS6 607 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 ZER1Q7Z7L7 766 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 KRT78Q8N1N4 520 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 C12orf76Q8N812 135 aaPredicted RBP8.76□□□□□ -1.01
SMG6-202ENST00000354901 NEIL3Q8TAT5 605 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 PEX11GQ96HA9 241 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 GINS4Q9BRT9 223 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 ZNF69Q9UC07 566 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 FTSJ1Q9UET6 329 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 GLS2Q9UI32 602 aa8.76□□□□□ -1.01
SMG6-202ENST00000354901 XIRP2A4UGR9 3374 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZAR1LA6NP61 321 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 DVL2O14641 736 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 FRS3O43559 492 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 B4GALT2O60909 372 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 NTN1O95631 604 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 TCRBP04435 133 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 UCHL1P09936 223 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 NR2F1P10589 423 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 SELLP14151 372 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 PCBP3P57721 371 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZNF77Q15935 545 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZNF750Q32MQ0 723 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 KIAA1211LQ6NV74 962 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 HSDL2Q6YN16 418 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZNF730Q6ZMV8 503 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 PDZD9Q8IXQ8 264 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZNF565Q8N9K5 539 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 BVESQ8NE79 360 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 SFT2D1Q8WV19 159 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 CNOT9Q92600 299 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 RAD51AP1Q96B01 352 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 CXorf40BQ96DE9 158 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 RAD9AQ99638 391 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 MAPKAP1Q9BPZ7 522 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 TRABD2BA6NFA1 517 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 TMPRSS11DO60235 418 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 LILRB5O75023 590 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 SDC3O75056 442 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 IL1AP01583 271 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 H1F0P07305 194 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 H2AFB2P0C5Z0 115 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ADH5P11766 374 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ATP5A1P25705 553 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 RPL3P39023 403 aaKnown RBP8.75□□□□□ -1.01
SMG6-202ENST00000354901 HES5Q5TA89 166 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 C18orf63Q68DL7 685 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 C5orf46Q6UWT4 87 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ESPNLQ6ZVH7 1005 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 GPR135Q8IZ08 494 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
SMG6-202ENST00000354901 TOMM5Q8N4H5 51 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms