RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CASKO14936 926 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 PGRMC2O15173 223 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 PRODHO43272 600 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 NCR1O76036 304 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 FAM157BP0CG42 384 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 CERS1P27544 350 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 FGF9P31371 208 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 GABRA5P31644 462 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 AHRP35869 848 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 MTNR1AP48039 350 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SMSP52788 366 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 GFERP55789 205 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 INSL4Q14641 139 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 C18orf63Q68DL7 685 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TYW3Q6IPR3 259 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 CD200R1LQ6Q8B3 271 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 LHFPL3Q86UP9 236 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 WDR5BQ86VZ2 330 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF485Q8NCK3 441 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 C19orf18Q8NEA5 215 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 BAHD1Q8TBE0 780 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TMEM163Q8TC26 289 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZFAND1Q8TCF1 268 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZFPM2Q8WW38 1151 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 UFD1Q92890 307 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 RGMAQ96B86 450 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 UPRTQ96BW1 309 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ARHGAP9Q9BRR9 750 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 PRR14Q9BWN1 585 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 PITHD1Q9GZP4 211 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 OR51I1Q9H343 314 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 FGF20Q9NP95 211 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 RBFOX1Q9NWB1 397 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 NLKQ9UBE8 527 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 PILRBQ9UKJ0 227 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ASB4Q9Y574 426 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 CCDC163A0A0D9SF12 145 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 A0A0X1KG70 313 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 A0A1W2PR48 441 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 H0YGG7 62 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 M0R296 226 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 LAMTOR5O43504 91 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 HCN1O60741 890 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 NTN1O95631 604 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF888P0CJ79 500 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 NR2F1P10589 423 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ATP5A1P25705 553 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ERP29P30040 261 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 GZMKP49863 264 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ARF3P61204 181 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 HNRNPKP61978 463 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 PPP3R1P63098 170 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 NDUFA9Q16795 377 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ENTPD8Q5MY95 495 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 LYSMD4Q5XG99 296 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TRIQKQ629K1 86 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 C11orf74Q86VG3 221 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 GKN2Q86XP6 184 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 LIX1LQ8IVB5 337 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SLC35F3Q8IY50 421 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ACOT4Q8N9L9 421 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 AVL9Q8NBF6 648 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 DUSP18Q8NEJ0 188 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 OR8D4Q8NGM9 314 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZC3HAV1LQ96H79 300 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SENP5Q96HI0 755 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 MAP3K3Q99759 626 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 GON7Q9BXV9 100 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 HDHD5Q9BXW7 423 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SAP130Q9H0E3 1048 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 P2RX2Q9UBL9 471 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 KLHL21Q9UJP4 597 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 POMT2Q9UKY4 750 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 GSTK1Q9Y2Q3 226 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TMA7Q9Y2S6 64 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 RNF215Q9Y6U7 377 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SLC9B1P1A6NJY1 282 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 C2orf74A8MZ97 194 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TBX19O60806 448 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF780AO75290 641 aaPredicted RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 UBXN7O94888 489 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SMIM10L1P0DMW3 83 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 HTR2BP41595 481 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 MAP4K2Q12851 820 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 IL18Q14116 193 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 LPAL2Q16609 132 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 WDR45BQ5MNZ6 344 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 MRM1Q6IN84 353 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 KANSL1Q7Z3B3 1105 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ARIH2OSQ8N7S6 290 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 OR2L5Q8NG80 312 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ZCCHC10Q8TBK6 192 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TRIM63Q969Q1 353 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SLC22A18Q96BI1 424 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 SMIM10Q96HG1 83 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 ATF6BQ99941 703 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 TMED9Q9BVK6 235 aa7.99□□□□□ -1.13
TRIM55-204ENST00000353317 QRSL1Q9H0R6 528 aaKnown RBP7.99□□□□□ -1.13
TRIM55-204ENST00000353317 IRF2BPLQ9H1B7 796 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms