RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DGCR6Q14129 220 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 PRTGQ2VWP7 1150 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 FAM214AQ32MH5 1076 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ZNF750Q32MQ0 723 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 DEFB134Q4QY38 66 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ZNF628Q5EBL2 1059 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 MFSD12Q6NUT3 480 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 IGFL3Q6UXB1 125 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 CD300LDQ6UXZ3 194 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 SZRD1Q7Z422 152 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 CCDC71Q8IV32 467 aaPredicted RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 ERI1Q8IV48 349 aaKnown RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 ENTHD1Q8IYW4 607 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 CARFQ8N187 725 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 SVOPQ8N4V2 548 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 DNAJC22Q8N4W6 341 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ZCCHC10Q8TBK6 192 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 TANKQ92844 425 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 PMM1Q92871 262 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 PRRC1Q96M27 445 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ZNF285Q96NJ3 590 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ALPK1Q96QP1 1244 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 NODALQ96S42 347 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 CSF3RQ99062 836 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ARHGDIGQ99819 225 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 RSPO3Q9BXY4 272 aaPredicted RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 POLR2J2Q9GZM3 115 aaKnown RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 ENKD1Q9H0I2 346 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 POLR2J3Q9H1A7 115 aaKnown RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 SLC38A1Q9H2H9 487 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 ANKRD19PQ9H560 264 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 NMNAT1Q9HAN9 279 aaPredicted RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 FANCEQ9HB96 536 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 SCN3BQ9NY72 215 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 GPR83Q9NYM4 423 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 TRPC4Q9UBN4 977 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 EPHA6Q9UF33 1036 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 NDOR1Q9UHB4 597 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 TMCC3Q9ULS5 477 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 C19orf53Q9UNZ5 99 aaPredicted RBP7.59□□□□□ -1.19
CD44-205ENST00000352818 SH3GLB1Q9Y371 365 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 SNX5Q9Y5X3 404 aa7.59□□□□□ -1.19
CD44-205ENST00000352818 NOTCH1P46531 2555 aa7.59□□□□□ -1.2
CD44-205ENST00000352818 ZAR1LA6NP61 321 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 C21orf140B9A014 251 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 PCDH17O14917 1159 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 KCNAB3O43448 404 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 MPZL2O60487 215 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 SRPX2O60687 465 aaPredicted RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 WBP4O75554 376 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 TRMUO75648 421 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 UBXN7O94888 489 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 GPR75O95800 540 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 EPPINO95925 133 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 ALPPP05187 535 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 HEXAP06865 529 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 THBS1P07996 1170 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 C8orf89P0DMQ9 161 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 CYP4B1P13584 511 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 PVRP15151 417 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 ST6GAL1P15907 406 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 GABRB1P18505 474 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 RPS4Y1P22090 263 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 EEF1B2P24534 225 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 EPHA2P29317 976 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 KRT20P35900 424 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 PEX19P40855 299 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 EMP3P54852 163 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 HPCAP84074 193 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 IL1RL1Q01638 556 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 ALDH6A1Q02252 535 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 DYNC1I2Q13409 638 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 LTB4RQ15722 352 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 NDUFA9Q16795 377 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 DCST1Q5T197 706 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 GARNL3Q5VVW2 1013 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 FAM199XQ6PEV8 388 aaPredicted RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 FAM111BQ6SJ93 734 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 CLEC9AQ6UXN8 241 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 PRSS48Q7RTY5 328 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 CLVS1Q8IUQ0 354 aaPredicted RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 SLC44A2Q8IWA5 706 aaPredicted RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 TAGAPQ8N103 731 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 CA13Q8N1Q1 262 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 AQP11Q8NBQ7 271 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 OR7G2Q8NG99 324 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 OR9Q2Q8NGE9 314 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 RHOXF1Q8NHV9 184 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 CNIH3Q8TBE1 160 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 FAR1Q8WVX9 515 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 APH1BQ8WW43 257 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 HOXB13Q92826 284 aaPredicted RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 NMD3Q96D46 503 aaKnown RBP7.58□□□□□ -1.2
CD44-205ENST00000352818 CD180Q99467 661 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 STACQ99469 402 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 DPYSL5Q9BPU6 564 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 NIPSNAP1Q9BPW8 284 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 EVA1AQ9H8M9 152 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 POLE3Q9NRF9 147 aa7.58□□□□□ -1.2
CD44-205ENST00000352818 DUSP22Q9NRW4 184 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms