RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 WNT4P56705 351 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 PLAURQ03405 335 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 SRSF5Q13243 272 aaKnown RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 FGFBP1Q14512 234 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 RGS21Q2M5E4 152 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 SOWAHCQ53LP3 525 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 WDR45BQ5MNZ6 344 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 NKAIN2Q5VXU1 208 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 NXNL2Q5VZ03 156 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 TUBA3EQ6PEY2 450 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 PAQR6Q6TCH4 344 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 NPSR1Q6W5P4 371 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 MED25Q71SY5 747 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CMIPQ8IY22 773 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 ZNF614Q8N883 585 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 RCBTB1Q8NDN9 531 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 OR4N2Q8NGD1 307 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 PFN4Q8NHR9 129 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CHPT1Q8WUD6 406 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 COX4I2Q96KJ9 171 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 OR52D1Q9H346 318 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 UBQLN3Q9H347 655 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 RNF167Q9H6Y7 350 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 SIAEQ9HAT2 523 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 FAIMQ9NVQ4 179 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 TBCCD1Q9NVR7 557 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 NDUFB11Q9NX14 153 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 DNAJB12Q9NXW2 375 aaKnown RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 H2AFY2Q9P0M6 372 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 STUB1Q9UNE7 303 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 ERVK-19Q9WJR5 959 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CFL2Q9Y281 166 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CSNK1G3Q9Y6M4 447 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 A0A0B4J2E0 115 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 A0A1B0GX12 115 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 STK25O00506 426 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 BCAT2O15382 392 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 NUDT21O43809 227 aaKnown RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 IFNA16P05015 189 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 MAKP20794 623 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 MAOAP21397 527 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 SOX3P41225 446 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 RBM34P42696 430 aaKnown RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 GCGRP47871 477 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CXCL12P48061 93 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 RNF144AP50876 292 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 ZNF615Q8N8J6 731 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 OR7G1Q8NGA0 311 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 B4GALNT2Q8NHY0 566 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 FANK1Q8TC84 345 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 BPIFA2Q96DR5 249 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 MVB12AQ96EY5 273 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CDADC1Q9BWV3 514 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 DUSP15Q9H1R2 295 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 FN3KQ9H479 309 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CUTCQ9NTM9 273 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 KLHL3Q9UH77 587 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 CBLCQ9ULV8 474 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 EXOGQ9Y2C4 368 aaKnown RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 MMACHCQ9Y4U1 282 aa15.43■□□□□ 0.06
SAMM50-201ENST00000350028 TMEM184BQ9Y519 407 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-201ENST00000350028 IGHV1OR21-1A0A087WYE8 117 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 A0A1B0GWA3 101 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 TAF4O00268 1085 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 PFDN1O60925 122 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 ZGLP1P0C6A0 271 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 CT45A8P0DMV1 189 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 CT45A9P0DMV2 189 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 CPEP16870 476 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 HTR1FP30939 366 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 ACAA2P42765 397 aaKnown RBP15.42■□□□□ 0.06
SAMM50-201ENST00000350028 ARL4DP49703 201 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 AFF3P51826 1226 aaKnown RBP15.42■□□□□ 0.06
SAMM50-201ENST00000350028 PGDP52209 483 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 OR1D5P58170 312 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 RPS3AP61247 264 aaKnown RBP15.42■□□□□ 0.06
SAMM50-201ENST00000350028 HSD11B2P80365 405 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 CT45A2Q5DJT8 189 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 DCDC5Q6ZRR9 648 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 BMP8AQ7Z5Y6 402 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 PLXDC1Q8IUK5 500 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 PHC2Q8IXK0 858 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 METTL27Q8N6F8 245 aaPredicted RBP15.42■□□□□ 0.06
SAMM50-201ENST00000350028 LSMEM1Q8N8F7 131 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 C7orf57Q8NEG2 295 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 C16orf52Q8NHV5 167 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 ERVMER34-1Q9H9K5 563 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 EXOSC4Q9NPD3 245 aaKnown RBP15.42■□□□□ 0.06
SAMM50-201ENST00000350028 ETAA1Q9NY74 926 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 FLRT3Q9NZU0 649 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 GMEB2Q9UKD1 530 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 SSR3Q9UNL2 185 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 DTX4Q9Y2E6 619 aa15.42■□□□□ 0.06
SAMM50-201ENST00000350028 KPNA4O00629 521 aaPredicted RBP15.41■□□□□ 0.06
SAMM50-201ENST00000350028 OR2B3O76000 313 aa15.41■□□□□ 0.06
SAMM50-201ENST00000350028 CD40LGP29965 261 aa15.41■□□□□ 0.06
SAMM50-201ENST00000350028 CRYBB2P43320 205 aa15.41■□□□□ 0.06
SAMM50-201ENST00000350028 PPP5CP53041 499 aa15.41■□□□□ 0.06
SAMM50-201ENST00000350028 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms