RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TYRP1P17643 537 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 GDNFP39905 211 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 MECP2P51608 486 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 CCR8P51685 355 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC7A9P82251 487 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 MC1RQ01726 317 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF528Q3MIS6 628 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF626Q68DY1 528 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TECPR1Q7Z6L1 1165 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 OR1M1Q8NGA1 313 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SETD7Q8WTS6 366 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC5A11Q8WWX8 675 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 NR4A3Q92570 626 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 PNPLA2Q96AD5 504 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF607Q96SK3 696 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 WFDC6Q9BQY6 131 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 GPN1Q9HCN4 374 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 HRASLSQ9HDD0 168 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 NKIRAS2Q9NYR9 191 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TAS2R5Q9NYW4 299 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 AHSPQ9NZD4 102 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 AKAP7Q9P0M2 348 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 NTMQ9P121 344 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 CYB5R1Q9UHQ9 305 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 MBD1Q9UIS9 605 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 DENND4AQ7Z401 1863 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TSPAN11A1L157 253 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 LINC00587B1AMM8 73 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 NEDD8-MDP1E9PL57 170 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 PGRMC2O15173 223 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF749O43361 778 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 CREBL2O60519 120 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 PRAMEF2O60811 474 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SH3BGRLO75368 114 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 FLT3LGP49771 235 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SIM1P81133 766 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 PRSS53Q2L4Q9 553 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC25A35Q3KQZ1 300 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 CCDC157Q569K6 752 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 HENMT1Q5T8I9 393 aaKnown RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 GDPD4Q6W3E5 623 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 FAM83HQ6ZRV2 1179 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 PXKQ7Z7A4 578 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TMPRSS11BQ86T26 416 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TMEM173Q86WV6 379 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TCEAL8Q8IYN2 117 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 HS6ST3Q8IZP7 471 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 MEIOBQ8N635 442 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TEX19Q8NA77 164 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 TMIEQ8NEW7 156 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 OR6K3Q8NGY3 331 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 PRRC1Q96M27 445 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 ZFP3Q96NJ6 502 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 ARL6Q9H0F7 186 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 CXorf36Q9H7Y0 433 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 RRAGCQ9HB90 399 aa9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 GPN3Q9UHW5 284 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 SIRT4Q9Y6E7 314 aaPredicted RBP9.63□□□□□ -0.87
CHRNA1-202ENST00000348749 DENND4CQ5VZ89 1909 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ANKRD61A6NGH8 418 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ANHXE9PGG2 379 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 TEX46H3BTG2 121 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ARPC1BO15143 372 aaKnown RBP9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 SURF4O15260 269 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 KLHL18O94889 574 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 CD70P32970 193 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 RFC3P40938 356 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 RAD52P43351 418 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 GATMP50440 423 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 CCL23P55773 120 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 TAS2R50P59544 299 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 AP3S2P59780 193 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 MAT1AQ00266 395 aaKnown RBP9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 CNTN1Q12860 1018 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 TSPAN31Q12999 210 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 RAB33AQ14088 237 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 SLBPQ14493 270 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 MAPK14Q16539 360 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 SFRP4Q6FHJ7 346 aaPredicted RBP9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 RFLNAQ6ZTI6 216 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 TBC1D19Q8N5T2 526 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 EID2Q8N6I1 236 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 TCEAL4Q96EI5 215 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 TMEM169Q96HH4 297 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 GSDMCQ9BYG8 508 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 OR10A4Q9H209 315 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ZDHHC6Q9H6R6 413 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ISG20L2Q9H9L3 353 aaKnown RBP9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 MIEF1Q9NQG6 463 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 ERVK-19Q9WJR5 959 aa9.62□□□□□ -0.87
CHRNA1-202ENST00000348749 GSAPA4D1B5 854 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ARPC5O15511 151 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TSPAN6O43657 245 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 PLPP2O43688 288 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 CDC123O75794 336 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ATG12O94817 140 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms