RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MKLN1Q9UL63 735 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 SLC35A3Q9Y2D2 325 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MYO10Q9HD67 2058 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 GPR171O14626 319 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 FMO6PO60774 539 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MRPL3P09001 348 aaKnown RBP10.22□□□□□ -0.77
CLCN6-202ENST00000346436 PPP5CP53041 499 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF585AQ6P3V2 769 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 SYT13Q7L8C5 426 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 VWA5B2Q8N398 1253 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 TM9SF2Q99805 663 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 OR10A4Q9H209 315 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 OPA3Q9H6K4 179 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 C2orf42Q9NWW7 574 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MMACHCQ9Y4U1 282 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 MCM3APO60318 1980 aa10.22□□□□□ -0.77
CLCN6-202ENST00000346436 C17orf113A0A1B0GUU1 675 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 CLCA1A8K7I4 914 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 ANHXE9PGG2 379 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 STMND1H3BQB6 276 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 RPP14O95059 124 aaKnown RBP10.21□□□□□ -0.77
CLCN6-202ENST00000346436 ITIH1P19827 911 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 CTSCP53634 463 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 PLCZ1Q86YW0 608 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 VRK3Q8IV63 474 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 THOC3Q96J01 351 aaKnown RBP10.21□□□□□ -0.77
CLCN6-202ENST00000346436 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-202ENST00000346436 A0A1W2PPK0 400 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 CELP19835 753 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 CSNK1A1P48729 337 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 UGT8Q16880 541 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 TUBA3EQ6PEY2 450 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 TMEM184AQ6ZMB5 413 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 SHISA6Q6ZSJ9 500 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 RTN4RL1Q86UN2 441 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-202ENST00000346436 OR52P1PQ8NH57 321 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 MACROD1Q9BQ69 325 aa10.21□□□□□ -0.77
CLCN6-202ENST00000346436 URM1Q9BTM9 101 aaKnown RBP10.21□□□□□ -0.77
CLCN6-202ENST00000346436 LRRC30A6NM36 301 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 RPE65Q16518 533 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 DESI1Q6ICB0 168 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM211Q6ICI0 200 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM107Q6UX40 140 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 GFRALQ6UXV0 394 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 DLEU7Q6UYE1 221 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 LAS2Q8IYD9 372 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 RCBTB1Q8NDN9 531 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 C16orf78Q8WTQ4 265 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 WBP2Q969T9 261 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF419Q96HQ0 510 aaPredicted RBP10.21□□□□□ -0.78
CLCN6-202ENST00000346436 NTMT1Q9BV86 223 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 OR51I1Q9H343 314 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 RDH14Q9HBH5 336 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 C14orf166Q9Y224 244 aaKnown RBP10.21□□□□□ -0.78
CLCN6-202ENST00000346436 BPNT1O95861 308 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 CAPNS1P04632 268 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 SSTR4P31391 388 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 UQCRC1P31930 480 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 TGFBR1P36897 503 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 ID4P47928 161 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF45Q02386 682 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 MAP4K2Q12851 820 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 ULK3Q6PHR2 472 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF367Q7RTV3 350 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 S100A7AQ86SG5 101 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM19Q96HH6 336 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 IKZF5Q9H5V7 419 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 NMNAT1Q9HAN9 279 aaPredicted RBP10.21□□□□□ -0.78
CLCN6-202ENST00000346436 ACOT13Q9NPJ3 140 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 KCNS2Q9ULS6 477 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 WIF1Q9Y5W5 379 aa10.21□□□□□ -0.78
CLCN6-202ENST00000346436 A0A087WUU8 490 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SGK494L7N484 410 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 FXYD1O00168 92 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ARHGAP33O14559 1287 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SCGNO76038 276 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 RAC2P15153 192 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 RIDAP52758 137 aaKnown RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SPHARQ15513 63 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SLC22A10Q63ZE4 541 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 GLT8D1Q68CQ7 371 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 GID4Q8IVV7 300 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM151AQ8N4L1 468 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR51G2Q8NGK0 314 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR5AR1Q8NGP9 310 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 CREB3L4Q8TEY5 395 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 LRR1Q96L50 414 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 FKRPQ9H9S5 495 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PLEKHA6Q9Y2H5 1048 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 SLC43A1O75387 559 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ZNF888P0CJ79 500 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ACSL1P33121 698 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 ADAM15Q13444 863 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 PIN1Q13526 163 aaPredicted RBP10.2□□□□□ -0.78
CLCN6-202ENST00000346436 LEXMQ3ZCV2 418 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 B3GNT7Q8NFL0 401 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 OR1N1Q8NGS0 311 aa10.2□□□□□ -0.78
CLCN6-202ENST00000346436 TMEM41AQ96HV5 264 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms