RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 IGF2-ASQ6U949 168 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 KANSL1Q7Z3B3 1105 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 ZER1Q7Z7L7 766 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 ZAR1Q86SH2 424 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 PLXDC1Q8IUK5 500 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF619Q8N2I2 560 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 MORN4Q8NDC4 146 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 OR4N2Q8NGD1 307 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 OR1L3Q8NH93 324 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 PIGKQ92643 395 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 RBM18Q96H35 190 aaKnown RBP8.55□□□□□ -1.04
ATG4A-202ENST00000345734 NODALQ96S42 347 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 STACQ99469 402 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 CCDC90BQ9GZT6 254 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 PLGRKTQ9HBL7 147 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 NECTIN3Q9NQS3 549 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 DUSP22Q9NRW4 184 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 CUTCQ9NTM9 273 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 SEMA4GQ9NTN9 838 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 NDOR1Q9UHB4 597 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 CDC14AQ9UNH5 594 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 MGAT4BQ9UQ53 548 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 MRPS33Q9Y291 106 aaKnown RBP8.55□□□□□ -1.04
ATG4A-202ENST00000345734 DTX4Q9Y2E6 619 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 MN1Q10571 1320 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 AGAP5A6NIR3 686 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 H0YIG0 161 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 AGRPO00253 132 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF749O43361 778 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 GABRB1P18505 474 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 PCMT1P22061 227 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 PCSK6P29122 969 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 SLC5A2P31639 672 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 RFX3P48380 749 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 EMDP50402 254 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 UGT2B15P54855 530 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 RGS8P57771 180 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 CXCR4P61073 352 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 EEF1A1P68104 462 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 SLC35A2P78381 396 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 POU6F2P78424 691 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 TARDBPQ13148 414 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 PLK5Q496M5 336 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 GPR107Q5VW38 600 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 SIGIRRQ6IA17 410 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 NIPAL1Q6NVV3 410 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ZCCHC12Q6PEW1 402 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 TMPRSS9Q7Z410 1059 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 D2HGDHQ8N465 521 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 OR4K5Q8NGD3 323 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 RHOXF1Q8NHV9 184 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 DIO2Q92813 273 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ARSGQ96EG1 525 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 DGAT2Q96PD7 388 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 GPA33Q99795 319 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 NAA50Q9GZZ1 169 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LHPPQ9H008 270 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 DUSP21Q9H596 190 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 FOLH1BQ9HBA9 442 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 AMBNQ9NP70 447 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 DHCR7Q9UBM7 475 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 IFT52Q9Y366 437 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 TPRKBQ9Y3C4 175 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LY6G6EA0A0G2JKS1 128 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 A0A1B0GTQ1 180 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 MEGF11A6BM72 1044 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ZAR1LA6NP61 321 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 CLDN4O14493 209 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LAMTOR5O43504 91 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 KIAA0513O60268 411 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 BCAS1O75363 584 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 STX11O75558 287 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 CYP7B1O75881 506 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 INMTO95050 263 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 KCNK2O95069 426 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 NKX2-2O95096 273 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 THY1P04216 161 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 IFI6P09912 130 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 OSMP13725 252 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 PRG2P13727 222 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 RPS4Y1P22090 263 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 MMP11P24347 488 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 MAP2K4P45985 399 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 STT3AP46977 705 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 PGDP52209 483 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 NUDT6P53370 316 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 MAPK10P53779 464 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 PSG6Q00889 435 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LARS2Q15031 903 aaKnown RBP8.54□□□□□ -1.04
ATG4A-202ENST00000345734 HLA-BQ31612 363 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ENTPD8Q5MY95 495 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 GUSBP11Q6P575 273 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 LURAP1LQ8IV03 231 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF540Q8NDQ6 660 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 OR13F1Q8NGS4 319 aa8.54□□□□□ -1.04
ATG4A-202ENST00000345734 OR2I1PQ8NGU4 316 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms