RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ARHGAP40Q5TG30 622 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF705AQ6ZN79 300 aaPredicted RBP11.41□□□□□ -0.58
COL12A1-202ENST00000345356 PRSS42Q7Z5A4 293 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 YIPF6Q96EC8 236 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 DNAJA3Q96EY1 480 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 RBP7Q96R05 134 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 SLC19A3Q9BZV2 496 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 PGAP2Q9UHJ9 254 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 PRELID3BQ9Y3B1 194 aa11.41□□□□□ -0.58
COL12A1-202ENST00000345356 A0A0A6YYJ9 748 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 SHOXO15266 292 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 CSTAP01040 98 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 SLC5A12Q1EHB4 618 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 PIP5KL1Q5T9C9 394 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 ZBTB37Q5TC79 503 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 PM20D1Q6GTS8 502 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 C22orf39Q6P5X5 142 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 NLRP8Q86W28 1048 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 FNDC9Q8TBE3 224 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 LINC01599Q8WXQ3 324 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 PRRC1Q96M27 445 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 C1GALT1Q9NS00 363 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 TRABD2BA6NFA1 517 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM150CB9EJG8 249 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 SOCS5O75159 536 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 CXCL14O95715 111 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 GNRH1P01148 92 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 MTNR1BP49286 362 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 MCCD1P59942 119 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 RAB33AQ14088 237 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 KIAA0141Q14154 515 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 ALG10BQ5I7T1 473 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 AWAT2Q6E213 333 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 LRRC56Q8IYG6 542 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 GPR148Q8TDV2 347 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 RADILQ96JH8 1075 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 NIPSNAP1Q9BPW8 284 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 SLC12A9Q9BXP2 914 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 PITHD1Q9GZP4 211 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 ACTL8Q9H568 366 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 DIMT1Q9UNQ2 313 aaKnown RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 SLC31A1O15431 190 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 P2RX6O15547 441 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 GPR39O43194 453 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 RAD1O60671 282 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 PRKAR1BP31321 381 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 HMGCLP35914 325 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 PER3P56645 1201 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 LAS2Q8IYD9 372 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 LGALS14Q8TCE9 139 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 UBXN10Q96LJ8 280 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 IL17FQ96PD4 163 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 CXXC1Q9P0U4 656 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 C1orf226A1L170 272 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 SOX9P48436 509 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 HCCSP53701 268 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 INHBEP58166 350 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 LTBQ06643 244 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 MEPCEQ7L2J0 689 aaKnown RBP11.4□□□□□ -0.58
COL12A1-202ENST00000345356 BPIFB2Q8N4F0 458 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 CYB5D2Q8WUJ1 264 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 NTMT1Q9BV86 223 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 EGLN3Q9H6Z9 239 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM39AQ9NV64 488 aa11.4□□□□□ -0.58
COL12A1-202ENST00000345356 BAZ2AQ9UIF9 1905 aaKnown RBP11.4□□□□□ -0.59
COL12A1-202ENST00000345356 A0A087WZY1 265 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 EFCAB7A8K855 629 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 PHYHO14832 338 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 DRD2P14416 443 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 PGGHGQ32M88 737 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 DCST2Q5T1A1 773 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 TCTE3Q8IZS6 198 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 KDM8Q8N371 416 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 OR2T4Q8NH00 348 aa11.4□□□□□ -0.59
COL12A1-202ENST00000345356 A0A0U1RQK1 487 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 FEZF1A0PJY2 475 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 GPX5O75715 221 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CDC123O75794 336 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 GYPBP06028 91 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 SLC2A5P22732 501 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 GALK2Q01415 458 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 IRF4Q15306 451 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 YIF1BQ5BJH7 314 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TTLL10Q6ZVT0 673 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 BCDIN3DQ7Z5W3 292 aaKnown RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 SGPP2Q8IWX5 399 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 OR1M1Q8NGA1 313 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF582Q96NG8 517 aaPredicted RBP11.39□□□□□ -0.59
COL12A1-202ENST00000345356 PCYT2Q99447 389 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 PLCXD1Q9NUJ7 323 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 TNFSF12O43508 249 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 KCNK2O95069 426 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 EGFP01133 1207 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 CPT2P23786 658 aa11.39□□□□□ -0.59
COL12A1-202ENST00000345356 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms