RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 AMER2Q8N7J2 671 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 ZNF615Q8N8J6 731 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 OR4F15Q8NGB8 312 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 OR4C3Q8NH37 302 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 SLC38A2Q96QD8 506 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 OR52D1Q9H346 318 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 PALMDQ9NP74 551 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 HINT3Q9NQE9 182 aaKnown RBP17.1■□□□□ 0.33
RBM38-202ENST00000344785 LANCL2Q9NS86 450 aa17.1■□□□□ 0.33
RBM38-202ENST00000344785 IGHV1OR21-1A0A087WYE8 117 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 UNC119BA6NIH7 251 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 NPIPB9F8W1W9 429 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 SOCS6O14544 535 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 LIMS3P0CW19 117 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 LIMS4P0CW20 117 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 PSMD7P51665 324 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 CSTF1Q05048 431 aaKnown RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 FUT7Q11130 342 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 MINDY4Q4G0A6 757 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 GARNL3Q5VVW2 1013 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 CENPSQ8N2Z9 138 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 DNASE2BQ8WZ79 361 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 CDX2Q99626 313 aaPredicted RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 NXF2Q9GZY0 626 aaKnown RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 OR10A5Q9H207 317 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 FGF20Q9NP95 211 aaPredicted RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 POLE3Q9NRF9 147 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 EPHA6Q9UF33 1036 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 MRPS33Q9Y291 106 aaKnown RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 HEATR5AQ86XA9 2040 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 A0A0B4J2E0 115 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 A0A1B0GVT2 93 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 A0A1B0GWA3 101 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 A0A1B0GX12 115 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 SYNDIG1LA6NDD5 238 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 CLDN4O14493 209 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 FMO6PO60774 539 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 GCGRP47871 477 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 PRKCDQ05655 676 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 ATP1A4Q13733 1029 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 SNAP47Q5SQN1 464 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 SLC35F1Q5T1Q4 408 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 TTLL10Q6ZVT0 673 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 OR13C2Q8NGS9 318 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 GATAD2BQ8WXI9 593 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 ABTB1Q969K4 478 aaPredicted RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 ZNF649Q9BS31 505 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 HCAR1Q9BXC0 346 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 MED20Q9H944 212 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 PRDM6Q9NQX0 595 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 DHCR7Q9UBM7 475 aaKnown RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 CBLCQ9ULV8 474 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 YARS2Q9Y2Z4 477 aaKnown RBP17.09■□□□□ 0.33
RBM38-202ENST00000344785 WDFY3Q8IZQ1 3526 aa17.09■□□□□ 0.33
RBM38-202ENST00000344785 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 ZC3H12DA2A288 527 aaKnown RBP17.08■□□□□ 0.33
RBM38-202ENST00000344785 BHLHE40O14503 412 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 IFNA16P05015 189 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 ENDOUP21128 410 aaKnown RBP17.08■□□□□ 0.33
RBM38-202ENST00000344785 CSF2RBP32927 897 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 CDH11P55287 796 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 BNC1Q01954 994 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 RAB40BQ12829 278 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 C3orf38Q5JPI3 329 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 LHFPL3Q86UP9 236 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 CPOQ8IVL8 374 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 Q8N9G6 341 aaPredicted RBP17.08■□□□□ 0.33
RBM38-202ENST00000344785 OR2T33Q8NG76 320 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 PMM1Q92871 262 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 BPIFA2Q96DR5 249 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 SHDQ96IW2 340 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 C6orf62Q9GZU0 229 aaPredicted RBP17.08■□□□□ 0.33
RBM38-202ENST00000344785 B3GNT3Q9Y2A9 372 aa17.08■□□□□ 0.33
RBM38-202ENST00000344785 MYL12BO14950 172 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 LALBAP00709 142 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 ALAS2P22557 587 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 HSD17B7P56937 341 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 ZNHIT3Q15649 155 aaPredicted RBP17.08■□□□□ 0.32
RBM38-202ENST00000344785 KLHL22Q53GT1 634 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 PERM1Q5SV97 790 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 TSSK4Q6SA08 328 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 RNF113BQ8IZP6 322 aaKnown RBP17.08■□□□□ 0.32
RBM38-202ENST00000344785 CAMKK1Q8N5S9 505 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 CLDN22Q8N7P3 220 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 BCORP1Q8N888 145 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 ZNF485Q8NCK3 441 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 KBTBD8Q8NFY9 601 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 BRIX1Q8TDN6 353 aaKnown RBP17.08■□□□□ 0.32
RBM38-202ENST00000344785 PTPMT1Q8WUK0 201 aaPredicted RBP17.08■□□□□ 0.32
RBM38-202ENST00000344785 S100ZQ8WXG8 99 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 ZDHHC12Q96GR4 267 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 WDR12Q9GZL7 423 aaKnown RBP17.08■□□□□ 0.32
RBM38-202ENST00000344785 RAB33BQ9H082 229 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 MMP27Q9H306 513 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 EXOSC4Q9NPD3 245 aaKnown RBP17.08■□□□□ 0.32
RBM38-202ENST00000344785 NDUFB11Q9NX14 153 aa17.08■□□□□ 0.32
RBM38-202ENST00000344785 TP53BP1Q12888 1972 aaPredicted RBP17.07■□□□□ 0.32
RBM38-202ENST00000344785 TRAV27A0A087WT01 109 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms