RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KCNJ10P78508 379 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ASB18Q6ZVZ8 466 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 BAHD1Q8TBE0 780 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 PROKR1Q8TCW9 393 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 TMEM203Q969S6 136 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 SPTSSAQ969W0 71 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 OR4K3Q96R72 315 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 VAPAQ9P0L0 249 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ECH1Q13011 328 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 SLC22A10Q63ZE4 541 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 MMP21Q8N119 569 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 SPRYD4Q8WW59 207 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 MRGPRX3Q96LB0 322 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 SECISBP2Q96T21 854 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 CST11Q9H112 138 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 TESQ9UGI8 421 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 HSPE1-MOB4S4R3N1 261 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 RP1P56715 2156 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 GGT3PA6NGU5 568 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 H3BSH0 61 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 DCKP27707 260 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 APLNRP35414 380 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ENTPD1P49961 510 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 GPR85P60893 370 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 SLC48A1Q6P1K1 146 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 MVB12AQ96EY5 273 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 EGLN2Q96KS0 407 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ZFP3Q96NJ6 502 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 OR52A5Q9H2C5 316 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 UCKL1Q9NWZ5 548 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 TRBV5-4A0A0C4DH59 114 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 OSMP13725 252 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 MNX1P50219 401 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 MICAQ29983 383 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 LRFN4Q6PJG9 635 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 OR4K13Q8NH42 304 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 TM4SF18Q96CE8 201 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 FOLH1BQ9HBA9 442 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ICKQ9UPZ9 632 aa15.32■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF878C9JN71 531 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 HCRTR1O43613 425 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 GRK5P34947 590 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 C17orf67Q0P5P2 114 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 CCNJQ5T5M9 372 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 XKR5Q6UX68 686 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 UCN3Q969E3 161 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 FEVQ99581 238 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 TSPAN11A1L157 253 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 KRBA1A5PL33 1030 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 DDAH2O95865 285 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 HBA1P69905 142 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 RAB39AQ14964 217 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF775Q96BV0 537 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 TSPAN10Q9H1Z9 355 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 NGBQ9NPG2 151 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 TEX10Q9NXF1 929 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 NUDT21O43809 227 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 GKN3PP0CG01 181 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 PGAM2P15259 253 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 PDSS2Q86YH6 399 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF300Q96RE9 604 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 PIGUQ9H490 435 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 CUL9Q8IWT3 2517 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 FURINP09958 794 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 DRD3P35462 400 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 CDKN2CP42773 168 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 CSNK1A1P48729 337 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 SIRPAP78324 504 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 DNASE1L3Q13609 305 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 ELAVL1Q15717 326 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 FAM111BQ6SJ93 734 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 ZNF367Q7RTV3 350 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 HS3ST5Q8IZT8 346 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 NRSN2Q9GZP1 204 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 ENKD1Q9H0I2 346 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 INIPQ9NRY2 104 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 PCDHGA5Q9Y5G8 931 aa15.31■□□□□ 0.04
SMARCA4-201ENST00000344626 PRAMEF33A0A0G2JMD5 474 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 ARNTP27540 789 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 KIR2DL1P43626 348 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 PIN1Q13526 163 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 TUBA3CQ13748 450 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 FBXL20Q96IG2 436 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 PARPBPQ9NWS1 579 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 TRGV8A0A0C4DH27 118 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 FAM166BA8MTA8 275 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 H0YIG0 161 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 PRRG2O14669 202 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 MTRF1O75570 445 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 IL32P24001 234 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 LIM2P55344 173 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 AGAP7PQ5VUJ5 663 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 C18orf63Q68DL7 685 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 ZBTB46Q86UZ6 589 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 TIGD4Q8IY51 512 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 HOXB13Q92826 284 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 NINJ1Q92982 152 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 LRR1Q96L50 414 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 AGAP4Q96P64 663 aa15.3■□□□□ 0.04
SMARCA4-201ENST00000344626 DPH1Q9BZG8 443 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms