RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TXNDC15Q96J42 360 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF607Q96SK3 696 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 NRSN2Q9GZP1 204 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PAK1IP1Q9NWT1 392 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-201ENST00000343575 TCFL5Q9UL49 500 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 WDR45Q9Y484 360 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 PCDHGB3Q9Y5G1 929 aa13.56□□□□□ -0.24
CXCL12-201ENST00000343575 NPIPA5A0A0B4J1W7 369 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 TMEM200CA6NKL6 621 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 CLDN24A6NM45 220 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NPIPA7E9PJI5 369 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 hCG_2039718K7EN88 272 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 TAF4O00268 1085 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 KIAA0513O60268 411 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 STX11O75558 287 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 PDE9AO76083 593 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 DIRAS1O95057 198 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 IFNA14P01570 189 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 RAB40ALP0C0E4 278 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NPIPA8P0DM63 369 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ITGAMP11215 1152 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 RPS4Y1P22090 263 aaKnown RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 GP2P55259 537 aaKnown RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 CD47Q08722 323 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ZNHIT3Q15649 155 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF691Q5VV52 312 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 KIRREL2Q6UWL6 708 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 PIWIL3Q7Z3Z3 882 aaKnown RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 BCORP1Q8N888 145 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 OR5K1Q8NHB7 308 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ART5Q96L15 291 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 MBOAT4Q96T53 435 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 WWTR1Q9GZV5 400 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 MTHFD2LQ9H903 347 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 CALML5Q9NZT1 146 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NDUFAF4Q9P032 175 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 SEC14L3Q9UDX4 400 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 A3GALT2U3KPV4 340 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 IGHV1-45A0A0A0MS14 117 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 LOC100130705A0A1B0GUX0 176 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 CDC14CA4D256 554 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 AGAP5A6NIR3 686 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NPIPB9F8W1W9 429 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 PEX12O00623 359 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 SOCS6O14544 535 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 SOX30O94993 753 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NADKO95544 446 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 AK1P00568 194 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 COX6A1P12074 109 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 IL7RP16871 459 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 DRD5P21918 477 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 MMP11P24347 488 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ACVR2AP27037 513 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 STAT5AP42229 794 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 SLC26A5P58743 744 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 TUBA1BP68363 451 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 PLAURQ03405 335 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 GPR68Q15743 365 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF181Q2M3W8 571 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 IFI44LQ53G44 452 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 TUBA1AQ71U36 451 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 RBM45Q8IUH3 476 aaKnown RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NLGN4XQ8N0W4 816 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF619Q8N2I2 560 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ESX1Q8N693 406 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 NLGN4YQ8NFZ3 816 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-201ENST00000343575 IMMP1LQ96LU5 166 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 LPAR4Q99677 370 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 DGCR6LQ9BY27 220 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 Q9N2J8 555 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 ASCL3Q9NQ33 180 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 SCN3BQ9NY72 215 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 VNN3Q9NY84 501 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 CBLCQ9ULV8 474 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 PADI2Q9Y2J8 665 aa13.55□□□□□ -0.24
CXCL12-201ENST00000343575 FREM2Q5SZK8 3169 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 LOC101059948A0A1B0GTJ6 334 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 C2orf92A0A1B0GVN3 265 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 A0A1W2PQ72 361 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 FRG2CA6NGY1 282 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 ZNF354AO60765 605 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-201ENST00000343575 UGT2B17O75795 530 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 GUSBP08236 651 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 FOLR3P41439 243 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 ST13P50502 369 aaKnown RBP13.54□□□□□ -0.24
CXCL12-201ENST00000343575 IST1P53990 364 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 ISL1P61371 349 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 RNF4P78317 190 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 CAMK2BQ13554 666 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 MEP1AQ16819 746 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 SYT6Q5T7P8 510 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-201ENST00000343575 SLX4IPQ5VYV7 408 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 C16orf47Q6ZP98 133 aaPredicted RBP13.54□□□□□ -0.24
CXCL12-201ENST00000343575 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 KRT73Q86Y46 540 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 CLIP4Q8N3C7 705 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 RHOXF1Q8NHV9 184 aa13.54□□□□□ -0.24
CXCL12-201ENST00000343575 SPPL2AQ8TCT8 520 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms