RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 FBXO45P0C2W1 286 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 UGT2B7P16662 529 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 MAT1AQ00266 395 aaKnown RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 CNN3Q15417 329 aaKnown RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 SMAD2Q15796 467 aaKnown RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 CCNJQ5T5M9 372 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 WBP2NLQ6ICG8 309 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 DPY19L4Q7Z388 723 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 GPR148Q8TDV2 347 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 RAB39BQ96DA2 213 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 ALG8Q9BVK2 526 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 CXXC1Q9P0U4 656 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 MITFO75030 526 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 MYOGP15173 224 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 CTHP32929 405 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 GPR157Q5UAW9 335 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 GSG1LQ6UXU4 331 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 KIAA0907Q7Z7F0 614 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 BEST3Q8N1M1 668 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 BPIFA2Q96DR5 249 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 MYADMQ96S97 322 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 RABL2AQ9UBK7 228 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 RABL2BQ9UNT1 228 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 BAZ2AQ9UIF9 1905 aaKnown RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 H3BNC9 293 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 NME4O00746 187 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 IGHG1P01857 330 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 DCTP40126 519 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 SSR4P51571 173 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 ADARB1P78563 741 aaKnown RBP14.09□□□□□ -0.15
UBE3B-202ENST00000342494 VEZF1Q14119 521 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 TDHQ8IZJ6 230 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 HAVCR2Q8TDQ0 301 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 SMIM14Q96QK8 99 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 MGAT4CQ9UBM8 478 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 KCND3Q9UK17 655 aa14.09□□□□□ -0.15
UBE3B-202ENST00000342494 GABRR3A8MPY1 467 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 FAM155AB1AL88 458 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-202ENST00000342494 SNNO75324 88 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-202ENST00000342494 EDN1P05305 212 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 RETP07949 1114 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 DBHP09172 617 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 ERP29P30040 261 aaKnown RBP14.08□□□□□ -0.15
UBE3B-202ENST00000342494 ADIPOR2Q86V24 386 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 OR1J4Q8NGS1 313 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 CPT1CQ8TCG5 803 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 ASB11Q8WXH4 323 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 TP63Q9H3D4 680 aaPredicted RBP14.08□□□□□ -0.15
UBE3B-202ENST00000342494 TP53TG5Q9Y2B4 290 aa14.08□□□□□ -0.15
UBE3B-202ENST00000342494 LOC105369274A0A096LPK9 316 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 I3L521 148 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 SLC5A2P31639 672 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 HOXC5Q00444 222 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 BORAQ6PGQ7 559 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 OR4N4Q8N0Y3 316 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 LILRB2Q8N423 598 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 DEFB123Q8N688 67 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 MFSD9Q8NBP5 474 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 PAPD5Q8NDF8 572 aaKnown RBP14.08□□□□□ -0.16
UBE3B-202ENST00000342494 NXT1Q9UKK6 140 aaKnown RBP14.08□□□□□ -0.16
UBE3B-202ENST00000342494 MAB21L2Q9Y586 359 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 CDK2P24941 298 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 POU3F1Q03052 451 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-202ENST00000342494 CPZQ66K79 652 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 CFAP77Q6ZQR2 320 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 HS3ST2Q9Y278 367 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 CREBL2O60519 120 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-202ENST00000342494 SLC16A7O60669 478 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 CPOXP36551 454 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 SGSHP51688 502 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 SQSTM1Q13501 440 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 PAGE3Q5JUK9 113 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 B3GNT9Q6UX72 402 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 LINC00696Q6ZRV3 163 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 KLHDC9Q8NEP7 349 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 COG8Q96MW5 612 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 SLC6A5Q9Y345 797 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM265A0A087WTH1 108 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 C17orf113A0A1B0GUU1 675 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 C2orf72A6NCS6 295 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 KNG1P01042 644 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 PTH2RP49190 550 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 RAB38P57729 211 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 PLCXD3Q63HM9 321 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 OR7D2Q96RA2 312 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF300Q96RE9 604 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-202ENST00000342494 ZIC5Q96T25 663 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 EMC9Q9Y3B6 208 aa14.08□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF44P15621 663 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 CD53P19397 219 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 RPS5P46782 204 aaKnown RBP14.07□□□□□ -0.16
UBE3B-202ENST00000342494 NTRK2Q16620 822 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 VHLLQ6RSH7 139 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 ARRDC2Q8TBH0 407 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 AMDHD1Q96NU7 426 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 TREX1Q9NSU2 369 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 HAO2Q9NYQ3 351 aa14.07□□□□□ -0.16
UBE3B-202ENST00000342494 RHBDD3Q9Y3P4 386 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms