RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TMEM38AQ9H6F2 299 aa13.68□□□□□ -0.22
PBX3-201ENST00000342287 TMEM74BQ9NUR3 256 aa13.68□□□□□ -0.22
PBX3-201ENST00000342287 LRIT1Q9P2V4 623 aa13.68□□□□□ -0.22
PBX3-201ENST00000342287 RPS6KA6Q9UK32 745 aa13.68□□□□□ -0.22
PBX3-201ENST00000342287 MGAT4BQ9UQ53 548 aa13.68□□□□□ -0.22
PBX3-201ENST00000342287 SPAG17Q6Q759 2223 aa13.68□□□□□ -0.22
PBX3-201ENST00000342287 MYO1GB0I1T2 1018 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 CPN2P22792 545 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 PCGF2P35227 344 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 NCBP2P52298 156 aaKnown RBP eCLIP13.67□□□□□ -0.22
PBX3-201ENST00000342287 CASP9P55211 416 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 RPP38P78345 283 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 SRSF5Q13243 272 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 TIGD6Q17RP2 521 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 GCNT6Q5T4J0 391 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 SAXO2Q658L1 398 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 MAL2Q969L2 176 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 MAP3K3Q99759 626 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 IL1RAPQ9NPH3 570 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 SIRT3Q9NTG7 399 aaPredicted RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 MS4A12Q9NXJ0 267 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 KCMF1Q9P0J7 381 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 SUSD2Q9UGT4 822 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 CLCA3PQ9Y6N3 262 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 GOLGA4Q13439 2230 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 SGCEO43556 437 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 PDE9AO76083 593 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 SNAPINO95295 136 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 CST1P01037 141 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 NR2F6P10588 404 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 RYKP34925 604 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 SNRPNP63162 240 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 FAM92BQ6ZTR7 304 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 MCATQ8IVS2 390 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 RBM4BQ9BQ04 359 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 RBM4Q9BWF3 364 aaKnown RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 RAB33BQ9H082 229 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 CLEC4MQ9H2X3 399 aaPredicted RBP13.67□□□□□ -0.22
PBX3-201ENST00000342287 RASSF1Q9NS23 344 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 ZSCAN32Q9NX65 697 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 UBQLN2Q9UHD9 624 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 DAPP1Q9UN19 280 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 ABCG2Q9UNQ0 655 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 KCNMB2Q9Y691 235 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 CACNA1IQ9P0X4 2223 aa13.67□□□□□ -0.22
PBX3-201ENST00000342287 M0R082 166 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 GNB5O14775 395 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 MYL12BO14950 172 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 SRPX2O60687 465 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 MITFO75030 526 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 ZNF682O95780 498 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 IFNA7P01567 189 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 RNF224P0DH78 156 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 MYL12AP19105 171 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 MPIP34949 423 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 LIM2P55344 173 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 RUNX2Q13950 521 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 NKG7Q16617 165 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 TMPRSS11AQ6ZMR5 421 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 RASSF6Q6ZTQ3 369 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 C6orf120Q7Z4R8 191 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 GALNT10Q86SR1 603 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 CNRIP1Q96F85 164 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 ZDHHC12Q96GR4 267 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 COPS4Q9BT78 406 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 SLC19A3Q9BZV2 496 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 EPHA6Q9UF33 1036 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 PILRBQ9UKJ0 227 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 ZNF780BQ9Y6R6 833 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 SLC22A23A1A5C7 686 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 GATCO43716 136 aaKnown RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 NUDT21O43809 227 aaKnown RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 CSNK2A2P19784 350 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 SSTR2P30874 369 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 RAB25P57735 213 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 ZNF79Q15937 498 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 PLK5Q496M5 336 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 FCRLBQ6BAA4 426 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 MAML2Q8IZL2 1156 aaPredicted RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 DNAJC22Q8N4W6 341 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 RIBC2Q9H4K1 309 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 GALNT9Q9HCQ5 603 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 PRDM9Q9NQV7 894 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 GSN-AS1Q9NRJ2 163 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 MRPS2Q9Y399 296 aaKnown RBP13.66□□□□□ -0.22
PBX3-201ENST00000342287 ORC6Q9Y5N6 252 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 THADAQ6YHU6 1953 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 EFCAB10A6NFE3 127 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 TTLL8A6PVC2 850 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 LGALS8O00214 317 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 HCRTR1O43613 425 aa13.66□□□□□ -0.22
PBX3-201ENST00000342287 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms