RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CCR7P32248 378 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 OPRD1P41143 372 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 CAPZA1P52907 286 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 SIM1P81133 766 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-201ENST00000342245 MANEAQ5SRI9 462 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 FAM151BQ6UXP7 276 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 CEACAM19Q7Z692 300 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 TBC1D19Q8N5T2 526 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 RXFP4Q8TDU9 374 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 TCF7L1Q9HCS4 588 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 H2AFY2Q9P0M6 372 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF629Q9UEG4 869 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-201ENST00000342245 GPR52Q9Y2T5 361 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 RFXAPO00287 272 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 NDUFB6O95139 128 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 ATP1B1P05026 303 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 MPC1LP0DKB6 136 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 ACP5P13686 325 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 PAX6P26367 422 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 ART1P52961 327 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 EIF2S3LQ2VIR3 472 aaKnown RBP17.3■□□□□ 0.36
SMPD1-201ENST00000342245 NHLRC1Q6VVB1 395 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 RBMS3Q6XE24 437 aaKnown RBP17.3■□□□□ 0.36
SMPD1-201ENST00000342245 IQCHQ86VS3 1027 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 THEM5Q8N1Q8 247 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 SLC39A7Q92504 469 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 MS4A4EQ96PG1 132 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 GINS4Q9BRT9 223 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 FBXO44Q9H4M3 255 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 UFSP2Q9NUQ7 469 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 PPP1R14DQ9NXH3 145 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 AFF4Q9UHB7 1163 aaKnown RBP17.3■□□□□ 0.36
SMPD1-201ENST00000342245 PLEKHA6Q9Y2H5 1048 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 DMRT1Q9Y5R6 373 aa17.3■□□□□ 0.36
SMPD1-201ENST00000342245 PLPP2O43688 288 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 POP7O75817 140 aaKnown RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 KRT33AO76009 404 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 SOAT1P35610 550 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 SPAM1P38567 509 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 SGCAQ16586 387 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 ZXDCQ2QGD7 858 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 APOOLQ6UXV4 268 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 ASZ1Q8WWH4 475 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 PIGKQ92643 395 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 PRMT8Q9NR22 394 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 CRLS1Q9UJA2 301 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 TRBV23-1A0A0A0MS06 115 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 MEX3AA1L020 520 aaKnown RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 OR14I1A6ND48 311 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 RFPL4AA6NLU0 287 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 RFPL4AL1F8VTS6 287 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 DVL2O14641 736 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 PHYHO14832 338 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 PNLIPRP1P54315 467 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 EFEMP1Q12805 493 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 PDZK1IP1Q13113 114 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 DOC2AQ14183 400 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 SLC25A35Q3KQZ1 300 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 ATXN7L2Q5T6C5 722 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 FAM83HQ6ZRV2 1179 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 CFAP206Q8IYR0 622 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 ACBD7Q8N6N7 88 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 OR5W2Q8NH69 310 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 GTF3AQ92664 365 aaKnown RBP17.29■□□□□ 0.36
SMPD1-201ENST00000342245 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 ZFP42Q96MM3 310 aa17.29■□□□□ 0.36
SMPD1-201ENST00000342245 CHD5Q8TDI0 1954 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 ARGFXA6NJG6 315 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 TMEM127O75204 238 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 FURINP09958 794 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 ZNF8P17098 575 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-201ENST00000342245 UBE2IP63279 158 aaKnown RBP17.28■□□□□ 0.36
SMPD1-201ENST00000342245 RELQ04864 619 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-201ENST00000342245 SLC6A19Q695T7 634 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 MORN4Q8NDC4 146 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 ABHD4Q8TB40 342 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 BRIX1Q8TDN6 353 aaKnown RBP17.28■□□□□ 0.36
SMPD1-201ENST00000342245 C15orf40Q8WUR7 153 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 SLC38A5Q8WUX1 472 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 ASB11Q8WXH4 323 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 AUNIPQ9H7T9 357 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 KLHL1Q9NR64 748 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 INPP5EQ9NRR6 644 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 A0A0D9SEW6 157 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 GFYI3L273 518 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 MAT2AP31153 395 aaKnown RBP17.28■□□□□ 0.36
SMPD1-201ENST00000342245 NSG1P42857 185 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 LINGO2Q7L985 606 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 DNAAF1Q8NEP3 725 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 GPR156Q8NFN8 814 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 OR5AK3PQ8NH89 298 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 PHOSPHO1Q8TCT1 267 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 FCAMRQ8WWV6 532 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 NR4A3Q92570 626 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 OSTF1Q92882 214 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 PLA2G12AQ9BZM1 189 aa17.28■□□□□ 0.36
SMPD1-201ENST00000342245 SGK2Q9HBY8 427 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms