RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SOX3P41225 446 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ALDH9A1P49189 494 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 HNRNPKP61978 463 aaKnown RBP eCLIP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 KIR2DS5Q14953 304 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ZNF793Q6ZN11 406 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 C19orf18Q8NEA5 215 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 WDR36Q8NI36 951 aaKnown RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 GTPBP3Q969Y2 492 aaKnown RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ESRP2Q9H6T0 727 aaKnown RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 FAM60AQ9NP50 221 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ERI3O43414 337 aaKnown RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 TMPRSS11DO60235 418 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 APOC3P02656 99 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 PRPS2P11908 318 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ST6GAL1P15907 406 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 PTX3P26022 381 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 GFERP55789 205 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 RUNX1T1Q06455 604 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ANGPT1Q15389 498 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 SHBQ15464 509 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 SSX1Q16384 188 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 CLLU1Q5K131 121 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ZNF425Q6IV72 752 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 ANGPTL8Q6UXH0 198 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 KANSL1Q7Z3B3 1105 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 VN1R4Q7Z5H5 301 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 GKN2Q86XP6 184 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 CHCHD4Q8N4Q1 142 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 SRFBP1Q8NEF9 429 aaKnown RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 RBP7Q96R05 134 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 EPYCQ99645 322 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 TEX10Q9NXF1 929 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-201ENST00000340611 PCDHGA2Q9Y5H1 932 aa14.06□□□□□ -0.16
BRAT1-201ENST00000340611 LRIT2A6NDA9 550 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 E9PQ18 207 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 KHNYNO15037 678 aaKnown RBP14.05□□□□□ -0.16
BRAT1-201ENST00000340611 CKMT1AP12532 417 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 APEX1P27695 318 aaKnown RBP14.05□□□□□ -0.16
BRAT1-201ENST00000340611 SPIBQ01892 262 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 PUDPQ08623 228 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 C21orf62-AS1Q17RA5 79 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 AMZ1Q400G9 498 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 SPIN4Q56A73 249 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 FIGLAQ6QHK4 219 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 IQCHQ86VS3 1027 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 ATCAYQ86WG3 371 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 C16orf78Q8WTQ4 265 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 YIPF5Q969M3 257 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 RHBGQ9H310 441 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 TPT1P8Q9HAU6 139 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 SLC39A1Q9NY26 324 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 TINAGQ9UJW2 476 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 PLCL2Q9UPR0 1127 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 SERTM1A2A2V5 107 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 ZNF860A6NHJ4 632 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 GTPBP1O00178 669 aaKnown RBP14.05□□□□□ -0.16
BRAT1-201ENST00000340611 APOC1P02654 83 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 TPOP07202 933 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 HSD3B1P14060 373 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 GPX2P18283 190 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 ZP3P21754 424 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 HSD3B2P26439 372 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 BSGP35613 385 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 MEOX2P50222 304 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 S100A12P80511 92 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 ETFDHQ16134 617 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 TFAP2EQ6VUC0 442 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 PAQR7Q86WK9 346 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 LGI4Q8N135 537 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 UBE2E3Q969T4 207 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 SLC38A3Q99624 504 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 PCED1AQ9H1Q7 454 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 ERVK-19Q9WJR5 959 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 MRPS2Q9Y399 296 aaKnown RBP14.05□□□□□ -0.16
BRAT1-201ENST00000340611 KLK4Q9Y5K2 254 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 CELSR3Q9NYQ7 3312 aa14.05□□□□□ -0.16
BRAT1-201ENST00000340611 TRBC2A0A5B9 178 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 LMO7DNF2Z398 122 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 J3KTA2 159 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 BTF3P20290 206 aaKnown RBP14.04□□□□□ -0.16
BRAT1-201ENST00000340611 MAPK1P28482 360 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 WNT3P56703 355 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 CRYZQ08257 329 aaKnown RBP14.04□□□□□ -0.16
BRAT1-201ENST00000340611 EXOC3L2Q2M3D2 409 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 USP53Q70EK8 1073 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 PRSS41Q7RTY9 318 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 MS4A15Q8N5U1 240 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 POP5Q969H6 163 aaKnown RBP14.04□□□□□ -0.16
BRAT1-201ENST00000340611 FCRL1Q96LA6 429 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 CMAHPQ9Y471 501 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 A0A1W2PQL4 384 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-201ENST00000340611 hCG_1807616A0A1W2PRN6 198 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 A0A1W2PS29 197 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 UBXN7O94888 489 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 GIMD1P0DJR0 217 aa14.04□□□□□ -0.16
BRAT1-201ENST00000340611 HOXA1P49639 335 aaPredicted RBP14.04□□□□□ -0.16
BRAT1-201ENST00000340611 OR1D5P58170 312 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms