RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FAM189A2Q15884 450 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 SLC18B1Q6NT16 456 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 QSOX2Q6ZRP7 698 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 VRK2Q86Y07 508 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 PILRBQ9UKJ0 227 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ZNF879B4DU55 563 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OR2J2O76002 312 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OXSR1O95747 527 aaPredicted RBP11.94□□□□□ -0.5
LIN54-201ENST00000340417 PRKACGP22612 351 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 NUBP1P53384 320 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ACVR1Q04771 509 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 LANCL3Q6ZV70 420 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 DPH1Q9BZG8 443 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ACTR6Q9GZN1 396 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OCIAD1Q9NX40 245 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 PROCRQ9UNN8 238 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 SBF1O95248 1867 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 GPR171O14626 319 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 PLATP00750 562 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ADAM8P78325 824 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 FRMPD2BQ6IN97 320 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TRAPPC6BQ86SZ2 158 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
LIN54-201ENST00000340417 TMEM239Q8WW34 195 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 LHX9Q9NQ69 397 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 EIF1BO60739 113 aaKnown RBP11.93□□□□□ -0.5
LIN54-201ENST00000340417 JRKO75564 520 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TSPAN12O95859 305 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DPY19L2P1Q6NXN4 242 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ASB18Q6ZVZ8 466 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 C16orf58Q96GQ5 468 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 MPP4Q96JB8 637 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 MED18Q9BUE0 208 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 BTBD3Q9Y2F9 522 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TRBV5-4A0A0C4DH59 114 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 A0A1W2PRQ8 180 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 F5H5K5 113 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ACOX3O15254 700 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TOX3O15405 576 aaPredicted RBP11.93□□□□□ -0.5
LIN54-201ENST00000340417 PPP1R3DO95685 299 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 CCL4P13236 92 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ZNF35P13682 527 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 GADD45AP24522 165 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 OR3A3P47888 321 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 OR3A2P47893 321 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 PRR7Q8TB68 274 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 STT3AP46977 705 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 RPS18P62269 152 aaKnown RBP11.93□□□□□ -0.5
LIN54-201ENST00000340417 ZNF829Q3KNS6 432 aaPredicted RBP11.93□□□□□ -0.5
LIN54-201ENST00000340417 C19orf48Q6RUI8 117 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 PPIL1Q9Y3C6 166 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 A0A1B0GW55 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ANKRD30BLA7E2S9 258 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 ZNF587BE7ETH6 402 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4L2P0CJ85 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4L3P0CJ86 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4L4P0CJ87 422 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4L5P0CJ88 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4L6P0CJ89 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4L7P0CJ90 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TACR3P29371 465 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TRIM23P36406 574 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 SLC26A5P58743 744 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 HOXC5Q00444 222 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 TRIM16LQ309B1 348 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 MRPL2Q5T653 305 aaKnown RBP11.93□□□□□ -0.5
LIN54-201ENST00000340417 PRAMEF17Q5VTA0 474 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 SGCZQ96LD1 299 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 GPR87Q9BY21 358 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 DUX4Q9UBX2 424 aa11.93□□□□□ -0.5
LIN54-201ENST00000340417 LOC285556D6RIA3 1793 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 PLPP1O14494 284 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 HYAL3O43820 417 aaPredicted RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 SLC16A14Q7RTX9 510 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 TMEM105Q8N8V8 129 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 OR1J2Q8NGS2 313 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 ZNF878C9JN71 531 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 LCMT2O60294 686 aaKnown RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 MAGEA3P43357 314 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 SLC25A25Q6KCM7 469 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 LIN54Q6MZP7 749 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 MZT2BQ6NZ67 158 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 BORAQ6PGQ7 559 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 OR5M1Q8NGP8 315 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 ADAM18Q9Y3Q7 739 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 FKBP7Q9Y680 259 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 KNL1Q8NG31 2342 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 CHRM4P08173 479 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 TNFRSF1BP20333 461 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 HBA1P69905 142 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 CARFQ8N187 725 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 HOXB13Q92826 284 aaPredicted RBP11.92□□□□□ -0.5
LIN54-201ENST00000340417 NODALQ96S42 347 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 PDCD10Q9BUL8 212 aa11.92□□□□□ -0.5
LIN54-201ENST00000340417 MRPS26Q9BYN8 205 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms