RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ISYNA1Q9NPH2 558 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 C1GALT1Q9NS00 363 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 MED16Q9Y2X0 877 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 UBIAD1Q9Y5Z9 338 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 EVPLQ92817 2033 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SYT5O00445 386 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 PHOX2AO14813 284 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 PCDH7O60245 1069 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CREBL2O60519 120 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 PCDH8O95206 1070 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 IFNA2P01563 188 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 C1SP09871 688 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 RBMS1P29558 406 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CD200P41217 278 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 DAOAP59103 153 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 MRPS10P82664 201 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CAP1Q01518 475 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 ITKQ08881 620 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 KLF9Q13886 244 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 ARHGAP40Q5TG30 622 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 APOOLQ6UXV4 268 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 GOLGA7Q7Z5G4 137 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CDK20Q8IZL9 346 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 RASGEF1AQ8N9B8 481 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 SIDT2Q8NBJ9 832 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 NAXEQ8NCW5 288 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 OR6J1Q8NGC5 347 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 OR6K3Q8NGY3 331 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 OR6X1Q8NH79 312 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 ZCCHC10Q8TBK6 192 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 ASB16Q96NS5 453 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CNTNAP3BQ96NU0 1288 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM121BQ9BXQ6 578 aaPredicted RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CHST5Q9GZS9 411 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 UQCC1Q9NVA1 299 aa9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 CARHSP1Q9Y2V2 147 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 RPL36Q9Y3U8 105 aaKnown RBP9.02□□□□□ -0.97
PTCHD4-201ENST00000339488 TRBV4-1A0A0J9YWV2 114 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 DUXAA6NLW8 204 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 GFYI3L273 518 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 KIAA0355O15063 1070 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 AQP8O94778 261 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 VNN2O95498 520 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 OTCP00480 354 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 HTR2AP28223 471 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 PKIAP61925 76 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 IRF8Q02556 426 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 NHLH2Q02577 135 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ADIGQ0VDE8 80 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 GRB14Q14449 540 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 HEPACAMQ14CZ8 416 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ETFBKMTQ8IXQ9 262 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 TMIEQ8NEW7 156 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 OR13C4Q8NGS5 318 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 NPRL2Q8WTW4 380 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 PNPLA2Q96AD5 504 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 IP6K3Q96PC2 410 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ARHGAP9Q9BRR9 750 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 TMPRSS13Q9BYE2 586 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 SMCO4Q9NRQ5 59 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ARL5AQ9Y689 179 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 DOCK5Q9H7D0 1870 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 F5H5P2 479 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 SH3BGRLO75368 114 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 MOSPD3O75425 235 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 CA11O75493 328 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 GCM2O75603 506 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 HEXAP06865 529 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 VSIG10L2P0DP72 767 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC2A1P11166 492 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 PSMB1P20618 241 aaKnown RBP9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 THBS2P35442 1172 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ACVRL1P37023 503 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 RAB5CP51148 216 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 WNT3AP56704 352 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 HGFACQ04756 655 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 EGR3Q06889 387 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC10A7Q0GE19 358 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 DYRK1AQ13627 763 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM35AQ53FP2 167 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 SERPINA13PQ6UXR4 307 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ARIH2OSQ8N7S6 290 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 GPRC5AQ8NFJ5 357 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 OR4F15Q8NGB8 312 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ST7LQ8TDW4 575 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 FDXACB1Q9BRP7 624 aaPredicted RBP9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM208Q9BTX3 173 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 FAIM2Q9BWQ8 316 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 ZNF408Q9H9D4 720 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 LRTM1Q9HBL6 345 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 HRASLSQ9HDD0 168 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 TMEM138Q9NPI0 162 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 PTGFRNQ9P2B2 879 aa9.01□□□□□ -0.97
PTCHD4-201ENST00000339488 A0A1W2PRB8 838 aa9□□□□□ -0.97
PTCHD4-201ENST00000339488 SLC35G4P0C7Q5 338 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms